Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411775
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Entry
139411775 CDS
T10872
Name
(RefSeq) myoblast determination protein 1 homolog 1
KO
K09064
myogenic factor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411775
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Myogenic transcription factors
139411775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myf5
Basic
HLH
Motif
Other DBs
NCBI-GeneID:
139411775
NCBI-ProteinID:
XP_071014611
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All DBs
Position
6:88846716..88848805
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AA seq
276 aa
AA seq
DB search
MELPDIPFPITSPDDFYDDPCFNTSDMHFFEDLDPRLVHVGLLKPDDHHHKEDEHIRAPS
GHHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNDAFETLKRCTSTNPNQRLP
KVDILRNAISYIESLQGLLRGAGQEGNYYPVMDHYSGDSDASSPRSNCSDGMMDFNGQSC
PPRRRNKYDSTYFNEAPNDSRHKKNSVISSLDCLSNIVERITTDTSACPAVQDGSEGSSP
CSPGDGSIASENGAPIPSPINCVPALHDPNTIYQVL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggagttgccggatattcctttccctataacctctccagatgacttctacgacgaccct
tgcttcaacaccagcgacatgcatttctttgaggacctggacccgagactcgttcatgtg
ggtctcctcaagccggacgaccaccatcacaaagaggacgagcacatccgggcaccgagc
gggcaccaccaggccggcaggtgcctcctgtgggcctgcaaagcctgcaagaggaagacc
accaatgctgatcgtaggaaagcggctaccatgcgggaaagaaggcgactgagcaaggtg
aacgatgccttcgagacactgaagagatgtacgtctactaacccaaaccagaggctgccc
aaagtggatatcctgcggaatgccatcagctatattgagtctctccaaggcctgcttcgt
ggggccggacaggagggcaactattacccggtgatggatcactatagcggggactcggat
gcgtccagtccccgctccaactgctcagacggaatgatggatttcaatggtcagtcttgt
ccaccaagacggagaaacaagtatgatagcacctacttcaacgaagcaccaaatgattcc
agacacaagaagaactctgttatttccagtttggactgcctgtcaaacatcgtggagcga
atcactacggatacctctgcctgtcccgctgttcaggacggttccgagggtagcagcccc
tgttctcccggggatggttccatagcgagtgagaacggagcccccatcccgtccccgatc
aactgcgtccccgccttacatgacccaaacaccatctaccaggtgttgtga
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