Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411786
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Entry
139411786 CDS
T10872
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla01100
Metabolic pathways
Module
ocla_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
139411786
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
139411786
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139411786
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139411786
NCBI-ProteinID:
XP_071014631
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Position
6:complement(89235557..89351815)
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AA seq
800 aa
AA seq
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MAGRSRRAWFSVLLGLVVGFTLASRLILPKATELKKSGQKRKANPAGCGLNGGLRREFGG
ILWPPQDNGFSATEKPVPRSNNFLYVGVMTAQKYLNNRAIAAHRTWAQTIPGHVEFFSSE
GSDTTIPIPIVALHNVDDSYPPQKKSFMMLKYMHDHYLDQYEWFMRADDDVYIKSERLEG
FLRSLNSSEALFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGQCL
QEMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITL
HPNKNPPYQYRLHSYMLSRKIAQLRHRTVQLHREIVQMCRYGAAEPSREDLQLGMPPSFM
RFHPRLREEVLEWEFLTGKYLFSSSDGQPPRRGMDSSQHLALDDIIMQVMEMINANAKTR
GRVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFR
EEEEMDDKALASSINQDSDSLSFLSNSLKMFVPFKLSSSSQDQKEPKEPKVNILVPLSGR
YDIFVRFMTNLERVCLIPNQNVKLLILLFSTDNNTERVKQVELMREYHIKYPRAEMEIQP
VSGSFSRALALEVGSAHFSNDSLLFYCDVDLLFTTDFLKRCRSNTVLGEQTYFPIIFSQY
DPKVVYAGKVPSENHYVFTAKTGLWRHYGFGIVCVYKGDLVGAGGFDTSIQGWGLEDVDL
FNKFVQSGIRLFRSTDPGIVHIHHPVVCDPNLEPNQYKMCLGSKASSHGSTQQLAELWLE
KNDHGFRKVGSSNNESLRTA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaagccgaagagcatggtttagtgttctgttggggctggttgtcgggttc
accctggcttccagactcattttaccgaaggctacggagttgaagaaatccggtcagaaa
cgcaaggcgaacccagccggttgcgggttgaacggaggtctgaggagagaattcggtggg
atattatggcccccgcaagataacggattttcggcgaccgagaagccagttccgaggtcc
aacaatttcctttacgtcggcgtcatgactgcccagaagtacctgaataaccgcgccatc
gcggcacatagaacgtgggctcagaccatcccgggccatgtggagttcttctccagcgag
ggttcggacaccaccatccccatccccatcgtggcgctgcacaacgtggacgactcctac
ccaccgcagaagaagtccttcatgatgctcaagtacatgcacgatcactacctggaccaa
tatgagtggttcatgcgggccgacgatgatgtgtacatcaagagcgagcgcctggagggc
ttcctgcgctcgctcaacagcagcgaggccctcttcctgggccagacgggcatgggcgcc
cgcgacgagctgggcaagctggcgctggagcccggtgagaacttctgcatgggtggcccc
ggcgtgatcatgagccgcgaggtgctgcgccggatggttcctcacatcggccagtgcctg
caggagatgtacaccacgcatgaagacgttgaggtgggccgctgcgtgcgaaggtttgcc
ggcgtgcagtgtgtctggtcctacgagatgcagcagctgttctacgagaactacgagccc
aacaagaagggatacatccgcgacctccacaatagcaagatccaccgggccatcaccctg
caccccaacaagaacccgccctaccagtaccgcctgcacagctacatgctcagccgcaag
atcgcccagctccgccaccgcaccgtccagctccaccgtgagatcgtccagatgtgccgc
tacggggcggccgagcccagccgagaggacctgcagctgggcatgcctccatccttcatg
aggttccaccctcggctccgcgaggaagtcctggagtgggagttcctgacgggcaagtac
ctgttctcctcgtctgacggccaacccccccgccggggaatggactcctcccagcatctg
gccctggatgacatcatcatgcaggtgatggagatgattaacgccaacgccaagacgcgg
ggacgagtgatcgacttcaaggagatccagtacggctaccggcgggtcaaccccatgtac
ggggcggagtacgtgctggacctgttgctcctctacaagaagcacaaagggaagaccatg
acggtgccggtgaggagacatgcctacctccagcagaccttcagccagatccagttcaga
gaggaagaggagatggacgacaaggctctcgccagcagcatcaaccaggactctgactcc
ctgtccttcctctccaactccctcaagatgttcgtgcccttcaagctgtccagctctagc
caggaccagaaggagccgaaggagcctaaggtcaacatactggtgccgctctccggacgc
tacgacatctttgtccgcttcatgaccaatttagaacgggtgtgcctgatccccaaccag
aacgtcaagctgctcatcctcctcttcagcaccgacaacaacacagagcgggtcaagcag
gtggagctgatgagggagtaccacatcaagtacccccgtgccgagatggagatccagccc
gtgtcgggctccttctcccgggccttggctctggaggtgggctcggcccacttctccaac
gactcgctgctcttctattgcgacgtggacctgctcttcacaaccgacttcctcaagagg
tgccggagtaacacggtcctgggggagcagacctacttccccatcatcttcagtcagtac
gaccccaaggtggtttacgccggtaaggtgcccagtgagaaccactatgtgttcaccgcc
aagacgggtctgtggcgtcactacggcttcggcattgtctgtgtttacaaaggtgacctg
gttggggccgggggatttgacacctccatccaagggtggggtttggaggacgtggacctc
tttaacaagtttgtccaatcagggatccggttgttccggagcacggacccggggatcgta
cacattcaccatccagtagtgtgcgaccccaacctggagcccaaccagtacaagatgtgc
ctgggctccaaagcctcgtcgcacggctcgacacagcagctggctgaactgtggctcgag
aagaatgaccacggcttccggaaggtcgggagttcaaataatgaatccctcaggacagcg
tga
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