Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411852
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Entry
139411852 CDS
T10872
Name
(RefSeq) protein unc-13 homolog B-like
KO
K15293
protein unc-13 A/B/C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411852
Membrane trafficking [BR:
ocla04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
139411852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
zf-RING-like
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
139411852
NCBI-ProteinID:
XP_071014695
LinkDB
All DBs
Position
6:8059859..8138691
Genome browser
AA seq
2216 aa
AA seq
DB search
MFSKNRFNGQHGTPVAPKGDTKERVRKKRAPNPRVALVIREKIHRLLQGSGQELPTPDLY
YAGIEEEGGGEGQEKRKEATNIFVRCGPREEVCSSRIPTCKAHGGVSGASCIGEVELNRE
GCVRIPCTLQPNSRSQSPGKQKLSIPDGIRTVPEKRRTPKHQKWIIPAGIRTIPEQRRES
LHQNRISQNRNSSTFAAEAGAAGGKADFGRTRADQKRPVSMGDYVDYNFNRTRHDTLLEV
DEEEEDEEEEEEEEEEEEESSAIIEHILKELRGINKIQEEISDLRDYLSSVRGSVEEVSS
CVDAVLLEIEGIRSGNKASGSPGDGAWSGAAGGSDGSSFTPHQRPVSAYGSLGRQMVPSD
SNVCRPSVFSQRHSIHGMPVEFHLPTLEEKSTTVSPGTELVEPVGQQQEDDQLPKHSIPE
PTMVSKLSCGYLERQDDQDFPSTSSLSSEHSINSESVLERPSSSHGARRGGARGGSRGGG
VESWGGGGREHGGTEKTIWCEEHCYSRQRSLEEQEGEGPACLEGTGSWDRYRGSDGYSTG
TLAESSTGSSDLHSLHSSGLHYNSPAGTSSREEWRCHRRRLQQHHGTQVPTDIHSEYPSL
GYKGAADCLFPQSSGYHSVEGHTEGVESYGYTAPPTDLSYTTDCQVDSYLENYSGHEHDM
TEEFTEGTCTWGSLQVTCTTVAETDMPLVSTDEGVMLGHLPRPNSAEIQNVGFNVKRIGR
AVLDFSSALREALRKLEGPGTDKSPGDETEPTSFLLESQTNLPHADMSNVKCQTSKEDGL
DPGALDDTERLTQTCVLSSAHSDPCPGETLPEEVSDGHQQAQDDPYGPSLLPYSGQDVSQ
TGLDFASLGPEPMVSPPNAEAEEKGASPLPQGPTHTPTRNISLSQCTTVESLSLSFSAEE
SAPQEEQGDEPPSLSLPQPDTEDPEVPEPPAAPEGEAARDAAGKAERAEEHTLEISQREV
RRLKCLRTFQQILREKRESRRQLTIMTMSTFKEDNLIPDGSRHDDQGRDRDGEPSKHPWA
KPAGATPFGIDSMPDLRKKQPIPLVGELSLLQARKAGLSVATNTSIKDHELKSHVYKKTL
QALIYPISCTTPHAFQVWTASTPTYCYECEGLLWGIARQGMRCAECGVKVHEKCQELLNA
DCLQRAAEKSSKTGAEDRTQHIITAMKDRMKIRERNKPEIFEEIRAVFAVTKLLHAQQMK
TIEQNVLDGTSKWSAKITITVVSAQGLQAKDRTGSSDPYVTIQVGKTKKRTKTIYGNLNP
VWEETFNFECHNTSERIKLRVWDEDDDIKSRVKQRLKRESDDFLGQSIIEVRTLSGEMDV
WYNLEKRTDKSAVSGAIRLQISVEIEGEEKVASYHAQYTSLHENMFHYSTDVVGQGVVKM
PVAFGDDAWKVYFDEVHQNIVDEFALRYGIESIYQAMTHFACLSSKYMLSGIPAVMSTLL
ANINAFYAHPTTITNVSACDRFNASNFGKDRFVKLLDQLHNSLRIDLSTYRNNFPASSKP
RLQDLMSTVDLLTSITFFRMKVLELQNPPRAAHVVRDCVKACGNSTYEYIFNNCIDLYMR
QFQPALEEEVKKEPEETGPTIHNLDFWPKLITLIVSIIEEDNHSYTPIINQFPQELNVGK
VSGEVMWTLFAQDMKYALEEHEKHRLCKSADYMNLHFKVKWLYNEYVTDLPSFQDTVPEY
SAWFLPFVLQWLGENEDVSMEFMHGALERDKREGFQQTSEHALFSSSVVDIFTQLNQSFE
IIRKLDCPDLKVQGHYNRRFAKTITKVLMQYCAILSKEFPSYCQKEKIPCVLMNNIQQMR
VLLERMFECMGAKQLDSETADILNDLQVKLTTVLDNLSSMFGKSFQARLTACMHQMAEIV
YQITGHPNRQTAEADADNMLRPLMDFLDVNLSLFADTCEKTVLKRILKDLWKIVLSSLEK
TIILPQSDNGFGAQILTVAKGLSNLKAGGEAKSLTPKQCVIMEAALETIKQYFHAGGNGL
KKTYVEKSPELSKLKYTLSLYSQSTDALIKTFVTTQHTQVHNEIGIRITPSEKVWPERGS
GAEKSIGEAQIQIDMVPPGKDKIHKVNIRVIAVNDMKWQTSGMFRPFVEVNMIGPLLTAQ
KRKFTTKSKNNSWTAKYNETFQFILGKESPDCYELQVTVKDYCFGRANRVVGVAVVQLRD
VADRKSCVCWCPLGRAIQKDETGVTVMRILSQRAADEVAKDFVKLKDETRPVEEGR
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaagaaccgcttcaatggacaacacggaacacccgttgcacccaaaggcgac
accaaggaacgggttcgcaaaaagagggcccccaaccccagggtagcgcttgtcattcgg
gagaagatccaccgcctgctccaaggatccggccaggaactacccaccccagacctttac
tatgctgggatcgaggaggaggggggaggagagggacaggagaagagaaaggaggccaca
aatatttttgtgaggtgtgggcccagagaggaagtttgctcctcgaggatccccacctgt
aaggcacatggaggggtgtctggggcttcctgcattggggaggtggagctgaacagagag
ggctgtgtcaggatcccttgcactctgcagcccaatagcagaagccaatctccggggaag
cagaaattgagtatcccagacgggattaggactgtcccggaaaagagacgaacacccaaa
caccagaaatggataatcccggcaggtatccggaccattccagaacagagaagagaatcc
ctacaccagaaccggattagccaaaacaggaacagctcaacgtttgccgcagaggcaggg
gcagcaggagggaaggctgacttcggtcggacccgtgcagatcaaaagagacctgtttct
atgggtgactatgtggattacaacttcaacagaacacggcacgatactctgctggaggtg
gacgaggaagaagaagacgaggaggaggaggaagaggaggaagaggaggaagaggagtct
agtgccatcatcgagcacattctcaaagagcttagagggatcaacaaaatccaggaggag
atctcggacctgcgagattacctttcatccgtgcgtggctctgtagaggaggtgtcttcc
tgtgtggatgctgtgctcctggagatagagggcattcgctcaggaaacaaggctagtggc
agtccaggagatggggcttggtctggggcagcaggaggcagtgacggatcctccttcacc
cctcaccagaggcctgtcagcgcctacggcagtttaggcaggcagatggtgccttcagat
tccaatgtctgccgaccgtccgtcttcagccaacgccacagcatccacgggatgccagtg
gagttccacttgccaacattagaagagaagtctaccacagtctcgccaggcaccgaatta
gtggagcctgttggccagcagcaggaggatgatcagctgccgaaacacagcatcccagag
cccaccatggtcagcaaactgagctgtggctacctggagcggcaggacgaccaggacttc
ccaagcaccagctccctatcctcagaacacagcatcaattcagagtcggtccttgagaga
ccctcatccagccacggtgcaaggcgtggtggtgctagaggtggtagtaggggtggtggg
gtggagagctggggtggtggcggccgagaacatggtgggactgagaagactatatggtgt
gaagaacactgttattccagacagaggagtctggaagagcaggaaggagaggggcctgcc
tgtttggaggggacagggagctgggatcggtataggggctcagatgggtatagtactggt
accctggccgagtcctccacaggaagctccgacctccactctctccactcctctggacta
cactacaactcccccgccggcacttctagtcgcgaggagtggcgctgccatagacggagg
ctgcaacaacatcatgggactcaagttcctacagacatccactcagagtaccccagcctg
ggatacaagggtgctgctgattgcttatttccccagagctctggttaccactcagtggaa
ggacatacagaaggagtggagagctatggctacacagctcccccaacagatctcagctac
acaactgactgccaagtagatagttacctggagaactattctggccatgagcacgacatg
actgaagagtttacagaggggacctgtacctggggctcactacaggtgacctgtactact
gtggctgaaacagacatgccattggtcagtacagatgaaggagttatgctagggcacctc
ccgcgccctaacagcgcagagatccaaaatgttggttttaacgtgaagcggatcgggcga
gccgtgctggacttcagctccgccctgcgggaggcactacgcaagttggagggacccgga
accgacaagagtcctggagatgagactgagcccacaagctttttgttggagtctcaaaca
aacctaccccacgcagatatgtcaaacgtcaaatgccaaacgtcaaaagaggatgggttg
gacccaggggccttggacgacacagagagactaacccagacatgtgtcctctcctctgcc
cactcagacccctgcccaggtgaaaccctgccagaggaggtcagcgacggccaccaacag
gctcaggatgacccttacggaccttctctccttccttactccggacaggacgtttcccaa
acaggcctagactttgcttcacttggcccagagcctatggtctccccacccaatgcagag
gcagaagaaaaaggagcctctcctctgcctcagggcccaacacacacccccactcggaac
atctctctatcgcaatgcaccactgtagagtccctctcactctccttctcggctgaggag
tcggcaccccaggaggagcagggagacgaacccccatccctgtcgctgccacagcccgac
acagaagacccagaagtcccagaaccgcctgcagccccagaaggcgaggcagcaagagat
gcagcgggaaaggcagagagagcagaggagcacaccctggagataagccagagggaggtg
cggaggctgaagtgcctgaggaccttccagcagatccttcgggagaagagggagtcacgg
cgccagctcaccatcatgaccatgtccaccttcaaggaggacaacctcattccagatgga
agtcgacatgacgatcagggccgagacagagatggagagcccagcaagcacccgtgggcc
aagcctgctggtgccacgccctttggaatcgacagtatgcctgacctccgcaaaaaacag
cctatccccctggtcggcgagctgtccctgttgcaggccaggaaggcagggctctctgtg
gctacaaatacatccatcaaggaccatgagctgaagagccacgtttataagaaaaccctg
caggctctgatctaccccatctcctgcacaacgccccatgccttccaggtgtggactgcc
tccacacccacctactgctatgagtgtgaggggctgctgtggggcatcgcccgccagggc
atgaggtgtgctgagtgtggggtcaaagttcacgagaagtgccaggagctgctcaacgct
gactgtctgcagagggcggctgagaagagctctaagacaggggcagaggaccggacgcag
cacatcatcacagcaatgaaggacaggatgaagatcagggagaggaacaagccggagatc
tttgaggagatcagggctgtgttcgccgtcactaagctgctccatgcgcagcagatgaag
accatagaacagaacgtgttagacggaacctccaagtggtctgccaagatcaccatcacc
gttgtcagtgctcagggtctccaggctaaagacaggactggctccagtgacccctatgtg
accatccaggtgggaaagactaagaagagaaccaagaccatctacggaaacctcaaccct
gtctgggaggagacgttcaactttgagtgccacaacacgtcagaacggatcaagctgcgt
gtttgggacgaggatgatgacattaagtccagggtgaaacagcgtctcaagagagagtct
gatgacttccttggtcagagcatcatcgaggtcagaacactcagcggagagatggacgtc
tggtacaacctggagaagaggactgataagtcagcagtgtctggggccatcaggttacag
atcagtgtggagattgaaggggaggagaaagtagcatcctaccacgctcagtacaccagc
ctgcatgagaacatgttccattactctactgatgttgtgggtcagggggtagtgaagatg
cctgttgcctttggagatgatgcatggaaggtctactttgacgaggtgcatcagaatatc
gtggacgagttcgccttgcgctatggcatcgagtccatctaccaggccatgactcacttt
gcctgtctgtcctctaagtacatgttgtctggtattcctgctgtgatgagtactctattg
gccaatatcaacgccttctacgcccatcctacgaccatcaccaacgtctccgcatgtgac
cgcttcaatgcctccaacttcgggaaagatcgttttgttaagcttcttgatcagctacac
aactctcttcgtattgacctctccacatacagaaataacttcccagccagtagtaagcct
cgtctgcaggacctgatgtctactgtggatctgctgactagcatcaccttcttcagaatg
aaggtgttggaacttcagaaccctcccagggcagcccatgtggtgagagactgcgtgaag
gcctgtggtaactccacctacgagtacatatttaacaactgtatagacctctacatgaga
cagttccagcccgccctagaggaggaagtgaagaaggagccagaagagacagggcctact
atccacaacctggacttctggccaaaactcatcaccctcatcgtctccatcatagaagaa
gataatcactcctacacacccatcattaaccagtttcctcaggagctcaacgtgggaaag
gtcagtggtgaggtcatgtggacgctgttcgctcaggacatgaagtatgccctagaagag
catgagaagcaccgtctgtgtaagagtgctgactacatgaatcttcacttcaaggtcaag
tggctttacaatgagtatgtgaccgacctgccttccttccaagacactgtaccagagtac
tctgcgtggtttttgccatttgtccttcagtggctgggtgagaacgaggatgtgtccatg
gagttcatgcatggagctctagagagggacaagagggaagggttccagcagacgtcggag
catgctctgttctccagttcagtagtggacatcttcacccagctcaaccagagctttgag
atcatcaggaaactagactgtccagacctcaaggtccagggccactacaacagacgcttc
gccaagaccatcaccaaggtgctgatgcagtactgtgctatcctgtccaaggagttcccc
tcctactgccagaaggagaagataccctgtgtgttgatgaataacatacaacagatgcgg
gtcttgttggagaggatgtttgagtgcatgggggctaaacagctggactccgagacagcg
gacatcttgaatgacctgcaggtcaaactgaccactgtcctggacaacctgagctccatg
tttggcaagagcttccaggcccgtctgactgcctgcatgcatcagatggctgagatcgtg
taccagatcacgggtcatcctaaccgccagacggccgaggccgacgctgacaacatgctg
aggcctctcatggacttcctggatgtaaatctgagtctgtttgctgacacctgtgagaag
acggttctgaagagaatactgaaggatctgtggaagatcgttctcagcagcttggagaag
accatcatcttacctcagagcgacaatggtttcggagctcagattctgaccgttgccaag
gggctgtctaacctgaaggcagggggcgaggccaaaagccttacacccaaacagtgtgtc
ataatggaggcggcgctggaaactattaagcaatacttccatgcggggggtaacggtctg
aagaagacctatgtggagaagagtcctgagctgtctaagctgaaatacactctgtccctc
tactctcagagcactgatgcactgattaagaccttcgtcaccacacagcacacacaggtt
cataatgagattggcatcaggattactccaagtgagaaggtttggcctgaaagaggttca
ggagcggagaagtctattggtgaggcccagatccagatagacatggtgcctccaggcaaa
gacaagatccacaaggtcaacatcagagtgatagcagtgaatgatatgaagtggcagaca
tcagggatgttccgtccctttgtggaggtcaatatgattggtccactcctcactgcccag
aagaggaagttcaccaccaagtcaaagaacaacagctggacagccaagtacaatgagacc
ttccaatttatcctgggtaaggagtctccagactgctatgagctgcaggtgacggtgaag
gactactgttttggccgggccaaccgtgtcgtgggcgtggccgtggtccagctgagggat
gtagctgacaggaagtcatgcgtgtgctggtgcccgctgggtagagccatccagaaggac
gagacgggcgtgacggtgatgcgtatcctgtctcagcgggcggccgacgaggtggccaag
gactttgtcaaactgaaggatgagacacgccctgtagaggaggggagatga
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integrated database retrieval system
