Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411873
Help
Entry
139411873 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139411873
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139411873
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139411873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Zn_SUZ12
zf-C2HC_2
zf-C2H2
Di19_C
Motif
Other DBs
NCBI-GeneID:
139411873
NCBI-ProteinID:
XP_071014724
LinkDB
All DBs
Position
6:complement(4558787..4582801)
Genome browser
AA seq
395 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGQRYKCLICYDYDLCASCYEGGATTTRHTAEHAVQCILTRVD
YDLYYGGESFSVEQPQAFTCPYCGRMGYTETSLQEHVTAEHTETSSEVICPICAVLPGGD
PNHVTGDFAAHLTLEHRAPRDLDESSGVRHVRRMIHPGRGLGGPRARRSNMHFTSSTSGG
SSTTQSSNYNREAMDPIGELLSQLSGVRRSAGSQLSSGPSASQLQQLQMQLQVDWQQTQA
TRQQLETARGTSQRGSRTSNHAGDHNANPGSNFFNNLSPNPEQQEPKTQSSTSQFLLNRL
SEPRLSEAEHQLCEGQWADRSLFVTELLLSTLLANPEHSEDDDDLRDYHDAVTRGSDGFA
AFEDMGCVGVMTLDVALQNLNLRELKNEQHPPALP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcatgaaggtgtgagctgcgacgcgtgtttgaaaggtaactttcgggggcag
cggtacaagtgtttaatttgctacgactacgacctgtgtgcctcgtgctacgagggcggc
gccacgaccaccaggcacacggcagagcacgccgtgcagtgtatactaaccagggtcgac
tacgacctatattatgggggagagtccttctcggtggagcagccccaggctttcacctgt
ccctactgtggcaggatgggctacacggagacttctctacaggagcacgtgactgcagag
cacacagagacctcctcagaggtgatctgtcccatatgtgctgtgctgcctggcggagac
cctaatcacgtgacgggcgacttcgctgctcatctcacacttgaacacagagcacccaga
gacttggatgagtcgagcggggtgcggcacgtgcgtaggatgatccacccgggtcggggt
ctaggggggccgagggcccgtcgatccaacatgcacttcacctcgtcaacctccgggggg
agctctaccacacagagctccaactacaacagggaggccatggatcctataggagagctg
ctgtcccagttgtcaggggtgcgtaggtcggcgggcagccagctgagttcaggtccttca
gcctcccagctacagcagctccagatgcagctccaggtggattggcagcagacccaggct
accagacagcagttggagacggcccggggcacctcgcaacgcggcagccgcacctccaac
cacgcaggggatcacaacgccaaccctggctccaacttcttcaacaaccttagtcccaac
ccggagcagcaggagcccaaaacacagagcagcacctcccagttccttctcaacagactg
agtgagccgaggttgtcagaggcggaacaccagctatgtgagggccagtgggcggaccgc
tctctcttcgtcacggagctcctcctctccaccctgctggccaatcccgaacacagcgaa
gacgacgacgatctccgtgactaccacgatgccgtgacgcgaggctcggatggcttcgcc
gccttcgaagatatgggctgcgtgggggtcatgaccctagacgtggctctgcagaacctc
aacctccgagaactgaagaacgagcagcatcccccggcgttgccgtag
DBGET
integrated database retrieval system
