Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411908
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Entry
139411908 CDS
T10872
Name
(RefSeq) AP-3 complex subunit sigma-1-like
KO
K12399
AP-3 complex subunit sigma
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
139411908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411908
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
AP-3 complex
139411908
Endosome - Golgi transport
139411908
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Ortholog
Paralog
GFIT
Motif
Pfam:
Clat_adaptor_s
FAD_binding_4
Motif
Other DBs
NCBI-GeneID:
139411908
NCBI-ProteinID:
XP_071014763
LinkDB
All DBs
Position
6:11881384..11898645
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AA seq
193 aa
AA seq
DB search
MIKAILIFNNHGKPRLSKFYEHYNEDTEQQIIRETFHLVSKRDENVCNFLEGGMLIGGSE
NRLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL
AEMVMGGMVLETNMNEIIIQVDAQNKMEKSEAGIAGAPARAVSAVKNMNLPEMPRNINIG
DISIKVPNLPSFK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagccatactaatattcaacaaccatgggaaacctcgtctttctaaattctac
gagcattacaacgaagacacggaacaacaaatcatcagagaaacatttcatctggtgtcc
aaaagagatgagaacgtctgcaattttctagaaggtggaatgttgattggtggatctgag
aacaggctcatctacagacactatgccacgctctactttgtattctgcgtcgattcctct
gagagcgagcttggcatcctagaccttatccaggtgtttgtggaaacattggacaaatgc
ttcgagaatgtctgtgaacttgacttaattttccacgtggacaaggtccacaatatactg
gcagagatggtgatgggggggatggtgctggagaccaacatgaatgagatcatcatacag
gtggacgcccaaaacaaaatggagaaatcggaggctggtattgcaggagcccctgctcgc
gcagtgtcagccgtaaagaacatgaacctccccgaaatgcccagaaacatcaacattgga
gacatcagcataaaagtgccaaacttaccctctttcaaatag
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