Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411929
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Entry
139411929 CDS
T10872
Name
(RefSeq) ubiquitin thioesterase Zranb1-like
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139411929
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139411929
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139411929
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C64
139411929
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
139411929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
139411929
NCBI-ProteinID:
XP_071014795
LinkDB
All DBs
Position
1:complement(73437310..73461123)
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AA seq
743 aa
AA seq
DB search
MTELGTKWACEYCTFENWPSAIKCTMCRAQRPSGGAIITEEPFRSSPGLDTSRQWEPPSL
SNSPPKGGSSLLICPDSSARPRVRIADTPETPSSKWSCHICTYLNWPRAIRCTQCLCQRH
RQEQHHHGLAQQPCSPTESPQTSGSGCRTAPPSTPTDPCEEYNDRNRLNTRAQHWTCAAC
TYANWPNACKCVVCDHPRPNSLTEPIELASEPESLPPSILNEQDRDNRRGGLGGGGGGVV
GCSGGQRRSPPTSKREAEVKMDFQRIELASGAGVGSIEEQQVDFKRLKQIKNRMRRTDWL
FLNACAGVVEGDLAAVEAYKSSGGDIARQLTSDEVRLLNRSSAFDDGFTLVHLAIRFQRQ
DMLAVLLTEVSQQAAKCIPAMVCPELTEQIRREVAASLHQRKGDFTCYFLTDLVTFTLPA
DIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWSIELGTRLDSRLYALWNRTAGDCLL
DSVLQATWGIYDKDSVLRKTLHDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLREEQWQE
DWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPL
LWEQSFCWKSPIALGYTRGHFSALVAMENDGFDNRGAGANLNTDDDVTVTFLPLVDSERK
LLHIHFLSAQEMGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLD
GYRQIRPCASLSDGEEEEEEEDE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctgggtaccaagtgggcctgtgagtactgcacgtttgagaactggccctcg
gccatcaagtgcaccatgtgccgcgcccagaggcccagcgggggcgccatcatcactgag
gagcccttccggagcagccccggcctggataccagccgccagtgggaacccccaagcctg
agtaacagcccgcctaagggaggctctagcctcctaatctgcccagactccagcgcccgt
ccccgtgtccgcattgcagacacccccgagaccccctccagcaagtggtcatgccacatt
tgcacctacctaaattggccccgtgccatccgctgcacccagtgtctgtgccagcgacat
cggcaggagcagcaccaccatggactggcacagcagccatgcagccccaccgagtcaccc
cagacctcaggctcaggatgccggaccgcacccccctctacccctaccgacccctgcgag
gagtataacgaccgcaaccgcctcaacacccgcgcccagcactggacctgtgccgcctgc
acttatgcaaactggcccaatgcgtgcaaatgtgtagtgtgtgaccaccctaggcccaat
agcctgacagaacctatcgaactggcctctgagccagagagcctaccaccctccatactc
aatgagcaggacagggacaacaggagggggggtttgggaggtggcggcggtggagtagtg
gggtgcagtggcggccagaggaggtccccacccacatccaagcgggaggcggaggttaaa
atggactttcagaggatcgaactggcttcgggagccggagtggggagcatagaggagcag
caggtggactttaaaaggctcaaacagataaagaacaggatgaggagaactgactggttg
tttctcaatgcctgtgcaggtgtggtagagggggacctggctgcagtagaggcctataag
tcatcagggggggacatcgccaggcagctgacgtccgacgaggtgcgtctcctcaaccgg
tcatcggccttcgacgacggcttcaccctggtacacctggccatccgcttccaaaggcag
gacatgctggcagtgctcctcactgaggtgtcccagcaggcagctaagtgtatcccagcc
atggtgtgccctgagctgacggagcagatccgtcgggaggtggctgcctccctgcaccag
cgcaagggagacttcacttgctactttctcactgacctggtcaccttcaccctgccagca
gatattgaggacttgcccccaacagttcaggagaaactgtttgacgaagtgctggaccga
gatgtacagaaagagctggaggaggagtctcccatcatcaactggtctatagagctaggc
acgcggttggacagcaggctgtatgccctgtggaaccgcacggccggggactgcctgtta
gactcagtactgcaggccacttggggcatctatgacaaggactctgtcctccgcaagacc
cttcacgacagcctgcatgactgctcccactggttctatacacgctggaaggagtgggag
tcgtggtactcccagagcttcggcttgcacttctcactccgagaggaacagtggcaggaa
gattgggctttcattctctcactggccagccagcctggagccagcctggagcagactcat
atttttgttcttgcacacattcttcgtagaccaatcatcgtctatggagtgaagtattac
aaaagtttccgtggtgaaacacttgggtacacccgttttcaaggtgtgtacttgcccctg
ttgtgggagcagagtttctgttggaagagtcccattgctctgggctacacgcgtggccac
ttctctgcactggtggccatggagaacgacggcttcgacaatcggggcgcaggcgccaac
ctcaacacagacgacgacgtcaccgtcaccttcctaccgctggtggacagcgagagaaaa
ttgctccacatccacttcctctcagcacaggagatgggtaatgaagagcagcaggagaag
ctgctgagagagtggttggactgctgcgtgacggagggcggagtgctggtggccatgcag
aagagctcccgcaggcggaaccaccccctggtcacacagatggtggagaagtggctggac
ggctaccgacagatccgcccctgcgcctcgctctccgacggcgaggaagaggaggaggag
gaggatgagtga
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