Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412008
Help
Entry
139412008 CDS
T10872
Name
(RefSeq) neurofilament light polypeptide-like isoform X1
KO
K04572
neurofilament light polypeptide
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139412008
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139412008
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139412008
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
139412008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Tropomyosin
TPR_MLP1_2
CdvA
Dimer_Tnp_hAT
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
139412008
NCBI-ProteinID:
XP_071014887
LinkDB
All DBs
Position
6:complement(27028824..27033295)
Genome browser
AA seq
569 aa
AA seq
DB search
MSSIAYDPYFPSSSHKRRVMLRSGGYGDSAGGMASRSVYSSHSAPLSYHGSSRLHYPTYS
RSSSMLLSTPRSAAAAELDISQAVQVSTEFKAVRTQEKAQLQELNDRFASFIERVHELEQ
QNKVLDAELLILRQRHGEPSHLRSLYEHEIRQLRAAVEEARDEKQAAQNHRDQMEEVLQS
LQGRYEEEVVSREEVEGQLMDARKGADEAALGRAELEKRTETLLDELAFLKRLHEGEIAE
LQAQVQYNAQVSVEMEVAKPDLSSALRDIRVQYEKLAHRNLQSAEEWFRSKVSVMTEGTA
RNTDNIRNAKEDAGEYRRLIQTRNQEIEACRDRNQSLENQLQEVEEEQSAEIAALQESIG
QLEDELRTTKNEMAQYLKDYQDLLNVKMALDIEIAAYRKLLEGEENRFSAVGPGAMSSVY
SQSLCVAPSRNRPMFSMQSSLTSGAPYLRMYSSSFSSADEIIAASQAQPAESSPQEEEEE
EGEKGDEEAKEEDVEEEKKAEDDNGDMKEEAEEEAKENGDDGGDENQEGRDGEEDGANET
EEGHDKGEEDESKKEEVAEEKEKPKDKNI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttccattgcttacgacccttactttccctcctcttcccacaagaggagggtgatg
ctgcgcagtggagggtatggagacagtgcgggagggatggcatccaggtctgtgtattcc
agccactctgcccccctctcataccatgggtcatcccgactgcattacccaacatacagc
cgtagctcctccatgctgctgtctacccccagatctgctgccgctgctgaactcgacatc
agccaggcggtgcaggtgagcactgagttcaaggccgtgcggacgcaggagaaagcccag
ctacaggagctgaatgaccgctttgccagtttcattgagcgcgtccacgagctggagcag
cagaacaaggtgctggatgctgaactgctgatcctcaggcagaggcatggcgagccctcc
cacctcaggtccctgtatgagcacgagatccgccagctccgtgctgctgtggaggaggcc
cgcgatgagaaacaggctgcccagaaccacagggaccagatggaggaggtgctgcagagt
ctgcagggacgttatgaagaggaggtagtgagcagggaagaggtggaggggcaactgatg
gatgccaggaaaggggcggatgaggctgctttgggccgtgctgagctggagaagaggacg
gagacgctgctggatgagctggccttcctgaaacgtctccatgagggggagatagctgag
ctgcaggcacaggtgcagtacaatgcccaggtgtccgtggagatggaggtggccaagcca
gacctgtcttcagccctccgagacatccgtgtccagtatgagaaactggcacatcgcaac
ctccagtcagccgaggaatggttccgcagcaaggtgagtgtgatgacagaaggcaccgcc
cgcaacacagacaacattcgcaatgccaaagaagatgccggggagtaccgccgcctgatt
caaacacggaaccaggagattgaagcctgccgtgataggaaccagtccctggagaatcag
ttacaggaggtagaggaggaacagagtgctgagatcgcagccctacaggaatcaattggc
cagctggaggatgagttgaggacaaccaagaatgaaatggctcagtacctgaaggattat
caagacctcttgaatgttaagatggctctggacatcgagatcgcagcttacaggaagctg
cttgaaggggaggagaatcgcttcagtgcagtaggaccaggggcaatgtccagtgtctat
tcccaaagcctgtgtgttgccccatcccgcaaccgccccatgttttcaatgcagtccagc
ctgacctctggtgccccctacctacgcatgtacagctcatcattctcctctgcagatgag
attatagctgctagtcaagcacagcctgctgagtcaagtcctcaggaggaagaggaggag
gaaggagagaagggagacgaggaagcaaaggaagaggatgttgaagaagagaaaaaagca
gaagatgacaatggagatatgaaagaagaggcagaagaggaggctaaagaaaatggagac
gatggaggagatgaaaaccaagaaggtagagatggagaggaggatggagccaatgaaaca
gaagaagggcatgataagggagaagaggatgaaagcaaaaaggaagaagtggcagaggaa
aaagagaagccaaaggacaaaaatatttaa
DBGET
integrated database retrieval system
