Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412124
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Entry
139412124 CDS
T10872
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139412124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139412124
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
139412124
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
139412124
NCBI-ProteinID:
XP_071015034
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Position
6:complement(52577976..52639700)
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AA seq
769 aa
AA seq
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MLQDFSEQREMAKQPANAPTGCNPLHQPEGVSANKPDNAFNQTSAAYPAPQPAQSNESKT
FCPTENKPGEPGEVKVYGTFKNAALPVPGSVAALSAARDIPVQYGDPLRVTGDQNNASGN
WTTMSQTTIILGADGNTSVQPGAVMGEEDEDESGDENKARGNWTNKLDFILSMVGYAVGL
GNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQG
CGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDCKDKDMLLLETC
ILHDKNITSVKNSSFCLSAQAIGNLTKLVNMTFPDNKTYVSPSEEYFKYNVLHISKGIEY
PGDIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILLFRGVTLPGAGD
GILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVCIV
NSATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIFF
LMLLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLGFPMVTENGMYM
LQLVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPTI
LTGILGLSLYQWKVMTYEDYTYPTWSMVMGWLMVLCSVIWIPIMFVIKMHLAPGSFTERL
KLVCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQLGAYQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggatttctccgagcagagagagatggccaaacagccggccaatgctcctacc
ggttgtaacccgttgcaccagccggagggagtttcagcaaacaaaccggataatgccttt
aaccaaacgtccgcagcatacccggcccctcagccagcacaatccaacgagagcaaaact
ttctgtcccacggaaaataaaccaggagaaccgggagaagtcaaagtctatgggacgttt
aaaaacgccgctctgccggtgcctggatccgtggctgctctctcggctgcccgggatatc
cctgtccagtacggggacccgcttagggtcaccggggatcaaaacaatgcatcgggcaac
tggaccaccatgagccagaccaccatcattctgggcgcagatggcaacacgtctgttcag
cccggcgcggtgatgggggaggaagacgaggacgagagtggagatgagaataaggccagg
ggaaactggactaataaattggatttcatcctgtccatggttggctatgcggtgggactg
ggaaacgtgtggaggtttccataccttgccttccaaaatggtggaggtgcttttttgatc
ccctaccttataatgttgtgcctcgccgggatccctatctttttattggaagtttccctg
ggtcagtttgccagccagggccccgtgtccgtgtggaaagccatcccggctctgcaaggt
tgcgggattgccatgttgataatatctgtcttgatagccatatactataacattattatg
tgctggacactgtactacctgttcgcttcgttgaagggctcactgccatgggctaactgt
aagaacgagtggaacacgttggactgtaaggacaaagacatgcttctcttagagacgtgt
atcctccatgataaaaacatcacctctgtaaagaacagctcgttctgtctgtcggctcaa
gccattggaaacctgaccaaactggttaacatgacctttccggataacaaaacttacgtc
agccccagcgaggagtacttcaagtacaatgtcttgcacatctccaaagggatagagtac
cctggagacatccgctggcccctcgcaggctgcctgttgctggcctggttgatagtctac
ctctccctggccaaaggaatcaagtcatcagggaaagtggtgtatttcacagctacgttc
ccctatgtggttctggtcattctgttgttcagaggagtgaccctcccaggggctggtgac
ggcatcctctacttcatcacacccaagtgggagaaactcaatgatgctaaggtttggaag
gatgctgccacccagattttcttctctctgtcagcagcctggggaggcctcatcacactg
tcttcttacaacaagttccacaacaactgctacagggacaccatcatagtgtgcatagtt
aacagtgccaccagtatattcgctgggttcgtcatcttttccgtcattggattcatggcc
cacgaactgaaggtgcccattgagaaggtggctgatgaaggtccaggcatagcgttcgtg
gtgtacccagaggctctgaccagactcccactctctccgttctgggccatcatcttcttc
ctcatgctgctgaccctcggcctggataccatgtttgccaccattgagaccatagtgacg
tcggtgtcagatgagttcccccagtacctgagaaagaacaagcctctgttcacactcatc
tgttgtgcctgtttcttcttcctgggattccctatggtcacagagaatgggatgtacatg
ctccagttggtggacacatacgctgcctcttactctctggtaatcattgccatctgtgag
ctgatcggaatctcctacttctatggcctgcagaggttctgcgaggacattgaaatgatg
attggcttccaaccaaaccgcttctggagaatctgctgggcctttgtgactcctaccatt
ctgactggtatcctggggctgagtctgtaccagtggaaggtgatgacctatgaggactac
acctaccccacctggtccatggtgatgggctggctgatggtgttgtgttctgtcatctgg
atcccaatcatgtttgtcatcaaaatgcacttggccccaggcagctttacagagcgtctg
aagctggtgtgttcccctcagcccgattggggtcccttcctggccaagcacagaggggag
cgctacaagaacatgatggacccccatggatccaactccctgggcctcaaactgcccccc
aaagatttccagctgggcgcctaccagtag
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