Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412219
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Entry
139412219 CDS
T10872
Name
(RefSeq) calcitonin-1-like isoform X1
KO
K12332
calcitonin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139412219
04081 Hormone signaling
139412219
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139412219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139412219
Cytokines and neuropeptides [BR:
ocla04052
]
Neuropeptides
GPCR binding
139412219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calc_CGRP_IAPP
Suppressor_P21
DUF6781
TA_inhibitor
Motif
Other DBs
NCBI-GeneID:
139412219
NCBI-ProteinID:
XP_071015142
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Position
6:complement(71937897..71940838)
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AA seq
143 aa
AA seq
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MCFTAGTMVMMKLSALLIAYFLVICQMYSSHAAPARTGLESITDQVTLTDYEARRLLNAI
VKEFVKMTSEELEQQANEGNSLDRPMSKRCSNLSTCVLGKLSQELHKLQTYPRTNTGSGT
PGKKRSLPESNRYASYGDSYDGI
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttaccgcagggaccatggttatgatgaagctctctgccctcctcattgcctat
ttcctggtcatttgtcagatgtacagctcacatgcagctccagccagaactggtttagag
tctataacagaccaagtcacgctaactgactatgaagcccgaaggctactcaacgccatc
gtcaaggagtttgttaaaatgacatcagaggaactggagcaacaagccaatgaaggaaat
agcctggatagacccatgtccaagcgttgctccaacctcagcacctgtgtgctgggcaaa
ctgtcccaagagctgcataaattgcagacgtacccccgcaccaacacgggaagtggcacg
cctggcaagaaacgcagcttgcctgagagcaaccgctatgcaagctatggagactcatat
gatggaatctga
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