Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412276
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Entry
139412276 CDS
T10872
Name
(RefSeq) ras-related protein Rab-11A
KO
K07904
Ras-related protein Rab-11A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139412276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139412276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139412276
04031 GTP-binding proteins [BR:
ocla04031
]
139412276
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
139412276
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139412276
Exosomal proteins of colorectal cancer cells
139412276
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
139412276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
PduV-EutP
AAA_16
ABC_tran
FeoB_N
TniB
YtzH
NTPase_1
Gtr1_RagA
AAA_14
DUF3289
FAD-SLDH
Motif
Other DBs
NCBI-GeneID:
139412276
NCBI-ProteinID:
XP_071015218
LinkDB
All DBs
Position
6:complement(88240586..88245692)
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AA seq
215 aa
AA seq
DB search
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTV
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADTNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQ
MSERQESDMSPSNNVVNIQVQPTENKPKMQCCQNI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccagagatgatgaatacgattatctgtttaaagtggttctgataggagactcg
ggtgttggcaagagcaacctgctctctcgtttcacccggaatgagtttaacctggaaagt
aagagcaccattggagtggagtttgccacccgcagtatccaggtggatgggaaaacggtg
aaggctcagatctgggacacggcaggacaggagcgctaccgggctatcacctcggcgtac
tacagaggcgcggtgggggccctgctggtctatgacatcgccaagcacctgacctatgaa
aatgtggaacggtggttgaaagagctgagagaccatgcagacaccaacatcgtcatcatg
ctggttggcaacaagagtgacctgcgtcacctccgggccgtgcccaccgacgaggctcgg
gcgttcgcagagaaaaacggtttgtctttccttgagacgtcagccctggattccaccaac
gttgaaacggctttccagaccattctgacagaaatctatcgaatcgtctctcagaagcag
atgtcagagcgtcaggagagcgacatgtctcctagcaacaatgtggtcaacatccaggtg
cagcccactgagaacaaaccaaagatgcagtgctgtcagaacatctag
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