Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412284
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Entry
139412284 CDS
T10872
Name
(RefSeq) transcription initiation factor IIA subunit 2
KO
K03123
transcription initiation factor TFIIA small subunit
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139412284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139412284
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
139412284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA_gamma_N
TFIIA_gamma_C
PPP1R35_C
Thermopsin
Motif
Other DBs
NCBI-GeneID:
139412284
NCBI-ProteinID:
XP_071015229
LinkDB
All DBs
Position
6:89582172..89584759
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AA seq
108 aa
AA seq
DB search
MAYQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKG
SLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGKNTGNAAE
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcataccagctctacagaaatacgacgctaggaaacagtctgcaagagagtcttgac
gagctaattcagacccaacagatcactcctcagttggcgcttcaggttctcctccagttt
gacaaagccatcaacacggcgctggccaaccgggttcgcaacagggtcaacttcaagggg
tcactaaacacctatagattctgtgacaacgtgtggaccttcgttctgaatgacgtggag
tttagggaagtgacagatctggtcaaggtggacaaagtcaagatcgtcgcctgcgatggg
aaaaacacgggcaatgctgcagagtga
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