Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412437
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Entry
139412437 CDS
T10872
Name
(RefSeq) mucin-5B-like
KO
K13908
mucin-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Others
Mucins
Secretory mucins
139412437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139412437
NCBI-ProteinID:
XP_071015328
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All DBs
Position
6:complement(70172830..70206894)
Genome browser
AA seq
3202 aa
AA seq
DB search
MKCLEQSQPFCHTFTSRRTKDLPFTQVLNWLSVSSGVSPMHNGQVCSTWGNYHFKTFDGD
IFQLPSTCNYVVTSLCHSSYEDFNIQMRRQVVDNQPTIRKITMKLDGVVVELSKGSVVVN
GKNATLPFSQSGILIEETPSYIKIKAKLGLVAIWNQEDSFLVEMDIKFRNKTCGLCGDFN
GVQQFDEFYSHGMKLSPVDFGNFWKLDGPTESCTEKTLLSNHKCPNLKPVCEQLLSGPAF
SSCKDLLAIDSFVEACVSDLCHCDNSTNSFCLCNTISEYSRQCVHAGGKPQQWRTEQFCY
KTCPFNMEYQECGNPCVDTCSNPERGQMCEEHCSDGCFCPPGTVFDDVNKNGCIALSQCS
CRHNGKTYAPGESYSSTCKDCSCGGGQWKCVDKDCPGTCAVEGGSHINTYDGKAYTFHGD
CSYVLTKDCDGMQFTVLGDLVQCGLSDSETCLKAVILSLSEGATVINIQPNGKAFVNGIY
SQLPFSVAGVTIFRASSFFIIVQTTFGLQLEIQLSPIMQVYIAASTVWQQRTCGLCGNFN
NNQGDDFKVLSGVTEGTAIGFANTWKTRASCPDIKSSFESPCSLSLDNEKYAQHWCSQLA
DPKGLFAPCHAAISPDMYKDNCMYDSCNCEKSEDCMCAAVSSYVHACAAEGIQLSGWRDT
ICNKYSTSCPSTMVYSYSMEISDRSCRCYSDSDFTCSITFEPVDGCVCSEGTYLDDEGKC
VPPASCPCYYKGSVVSPGEVISKDGTMCTCKEGKLHCIGDSPDHPSCVAPMVFVNCSNAS
PGVRGLECQKSCNILDMACISTECISGCMCPPGLVSDGKGGCIKPDLCPCSHNAATYQPG
DSIKVDCNTCTCKDRKWQCTTNLCHGTCAIYGDGHYITFDGKRFTFEGDCEYTLTKDYCG
NNNANGSFRVITENIPCGTTGTTCSKAIKLFLGNNELILTEGNYQVIERNTGEVVPYQIR
TMGIYLVIEANNGLILMWDRKTSMFIKLNPQFKGHVCGLCGNYDGNANNDFTTRSQAVVV
NPLDFGNSWKVSASCPDAKNKRSPCTANPYRQSWSQKQCSIIQSKVFTDCHSKVDPSSFY
DACVTDSCACDSGGDCECFCTAVAAYAEACNEAGACIAWRSPQICPLFCDYYNPPGECEW
HYKACGAQCMKTCRNPSGSCSTQIPPLEGCYPKCPPAQPFFDEDIMKCVEKEQCGCYGRD
GKHYNNGEKVPTTENCQTCYCNSVTVDCKYDVQACTCTYNGNKYPYGHIIYDTTDGHSSC
MTAVCGKNGTIQRDMYTCSTTTPSTSIPSHPTPSTNVPTTTSFSTVTTNVFTFSTPTPTP
LTTTTTPTTTTTPTTTILTSPAPATTSTTIPSTTTPIPTTTILTSTAPSTTKTTTLPSTT
TPTSTPTSTSTGASTTQCTGEESCVWSDWINLGQPTSGSEGGDNESIKNIIASGYHICSA
PEAVECRAKQYPGLQISQLGQDVTCNPSVGLICKNNEQGLQQKCFDYEIRVKCCQCPPTT
HIPTTTTTTTTVLSTTTPTPTTTILTSTAPSTTKTTTLPSTTTPTSTPTTTTTTVLSTTT
PTPTTTILTSTAPSTTKTTTLPSTTTPTSTPTSTSTGASTTQCTVLSTTTPTPTTTILTS
TAPSTTKTTTLPSTTTPTSTPTSTSTGATTTTTTTVLSTTTPTPTTTILTSTAPSTTTHI
PTTTTTTTTVLSTTTPTPTTTILTSTAPSTTKTTTLPSTTTPTSTPTTTTTVLSTTTPTP
TTTILTSTAPSTTKTTTLPSTTTPTSTPTSTSTGASTTQCTGEESCVCSIYHKNNNSAFY
YNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPVHCSIYHKN
NYSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNNSAFYYNSNLYSYINLNRSINYPVHC
SIYHKNNNSAFYYNSNLYSYINLNRSINYPQKCFDYEIRVKCCQCPPTTHIPTTTTTTTT
VLSTTTPTPTTTIPTTTTTTTTVLSTTTPTPTTTILTSTAPSTTKTTTLPSTTTPTSTPT
STSTGASTTQCTGEESCVWSDWINLGQPTSGSEGGDNESIKNIIASGYHICSAPEAVECR
AKQYPGLQISQLGQDVTCNPSVGLICKNNEQGLQQKCFDYEIRVKCCQCPPTTHIPTTTT
TTTTVLSTTTPTPTTTILTSTAPSTTKTTTLPSTTTPTSTPTTTTTTTVLSTTTPTPTTT
ILTSTAPSTTKTTTLPSTTTPTSTPTTHIPTTTTTTTTVLSTTTPTPTTTILTSTAPSTT
KTTTLPSTTTPTSTPTSTSTGASTTQCTGEESCVCSIYHKNNNSAFYYNSNLYSYINLNR
SINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNNSAFYYNSNPYS
YINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNNSAFYY
NSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPVHCSIYHKNN
NSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPVHCS
IYHKNNNSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSIN
YPVHCSIYHKNNNSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYIN
LNRSINYPVHCSIYHKNNNSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSN
LYSYINLNRSINYPVHCSIYHKNNNSAFYYNSNLYSYINLNRSINYPVHCSIYHKNNYSA
FYYNSNLYSYINLNRSINYPVHCSIYHKNNYSAFYYNSNLYSYINLNRSINYPTCKVETR
SFRCDVTTTPVTTTSPTTTLLPTTTTIPHTTERPTTTPKSTIEQHCPHEHPPRQNGDSWK
HNQCTNGTCANGKVIYEHVHCETPKPIACENNYPPIKVYDESGCCFHYECQCICYGWGDP
HYVTFDGTYYGFQGNCSYVLVKEILPKYNFSVVIDNYYCDAPDGLSCPQSLTIYYQSYKI
FMTKKDVDGVFTSLIYVNQQRIIPAYETKDFRITDNGIETLLVIPAINAKVSFTGLMFSI
YLPWDQFSGNTEGQCGTCDNNRTDDCRLPDGTIDSSCPDMAHQWHVADHNNSQCTPPLPP
PEPTPTPPTGCDPPICHLIQSK
NT seq
9609 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcttggaacagagccaacccttctgccacaccttcacgtccagaagaaccaag
gaccttcccttcactcaggtgctgaattggttatccgtttcctcaggagtgagtcctatg
cacaatggccaggtctgcagcacgtggggtaactaccacttcaagacctttgacggagac
atctttcagctcccctccacctgcaactatgttgtgacctcactgtgccatagcagttat
gaggatttcaacatccagatgaggcggcaggtggtggacaaccagcccaccattagaaag
atcaccatgaagctggatggtgtagtggtggagctttccaagggttccgttgttgttaat
gggaagaatgccaccttaccattcagccagtctggtattctcattgaagagactccctcc
tacatcaagatcaaagcaaaactgggattggtagccatctggaaccaggaggattccttc
ttggtggagatggacatcaaattcagaaacaagacctgtggtctatgtggagattttaat
ggagttcagcaatttgatgagttctatagccatggtatgaaattgtcccctgtcgacttc
ggaaacttctggaaattggatggtccaactgaaagctgtactgaaaaaacactgctttcg
aatcataaatgccccaatctgaaaccagtttgtgagcagttgctctccggtcctgccttc
agcagctgtaaggacttgttggccatcgactcatttgttgaggcctgtgtatctgacctg
tgccactgtgataacagcaccaactccttctgcctgtgtaacaccatctcagagtactcc
cgtcagtgtgttcatgcaggggggaagccccagcaatggaggactgaacagttctgctat
aaaacatgccccttcaacatggagtaccaggagtgtggaaacccctgtgttgacacctgc
tccaaccctgagagaggccagatgtgtgaggaacactgctcagatggctgcttttgtcct
ccaggcaccgtttttgatgacgtcaacaagaatggttgtatcgccttgagtcaatgctcc
tgccgccacaatggaaaaacctacgcacccggagagtcttattcaagcacttgtaaagat
tgctcctgtggtggtggtcagtggaagtgtgtggacaaggactgtcctggcacatgtgct
gtggagggaggatcccacatcaacacctatgatggaaaagcctacaccttccacggggac
tgctcttatgttctgaccaaggactgtgatgggatgcaattcactgtactgggtgatctg
gtgcagtgtgggctttctgacagtgagacttgtctaaaggctgttatcctgtccctctca
gaaggagccactgtgatcaacatacaacccaatggaaaagcctttgtaaatggaatctat
tctcagctgcccttttctgttgctggagtaactattttcagagcctcctcatttttcatc
atcgtccagaccacctttggcctccagttggaaatccaactctcaccaatcatgcaggtc
tatattgctgcaagcaccgtttggcagcagagaacttgcggtctttgtggaaacttcaac
aacaaccaaggagatgatttcaaggtcctgagcggagtgactgagggcacagccattggt
tttgcaaacacctggaaaacacgagccagctgcccagacatcaagagtagctttgaaagc
ccctgcagtttaagtcttgacaatgagaaatatgcgcagcactggtgctctcagctggct
gatcctaaagggttgtttgctccatgccacgcagcgataagcccagacatgtacaaagat
aactgcatgtatgacagctgtaactgtgagaagagtgaggactgcatgtgtgctgccgtc
tcctcttatgtccacgcttgtgctgccgagggtatccagctcagcggctggagagacact
atctgcaacaaatactccacctcgtgccctagcaccatggtctacagctacagcatggaa
atcagtgatcgctcctgccgctgctacagcgactctgactttacctgttcaatcaccttt
gagcctgtggatgggtgtgtctgttctgagggaacctacctggatgatgagggcaagtgt
gttccaccagccagctgcccttgttattacaagggctcagtggtgtcccctggagaggtc
atcagcaaggatggaaccatgtgcacctgcaaggagggaaaactccattgtattggagat
tcacctgatcatccatcatgtgttgcaccaatggttttcgtcaactgctccaatgcaagc
ccaggagtgagagggttagagtgtcagaagagctgcaatattctggatatggcctgtatc
agcacagagtgcatttcaggctgtatgtgtccccctggactggtatccgatggaaaagga
ggctgcatcaagccagacctttgtccttgttctcacaatgcagctacttaccaaccagga
gacagcatcaaggtcgactgcaatacctgcacttgtaaagacagaaaatggcagtgcaca
actaacctgtgccatggaacctgtgccatttatggagatggacactacattacttttgac
gggaaacgattcactttcgaaggagactgtgaatacactcttacaaaggactactgtgga
aacaacaatgccaatggcagcttcagagtcatcactgagaacattccctgtggaacaaca
ggcaccacctgctccaaggccatcaagctcttcctggggaacaatgaattaatcctgaca
gaagggaactaccaagtcattgagagaaatacaggggaggtggttccttaccagattcgt
acaatgggcatctaccttgtgattgaagccaataatgggttgattctcatgtgggacagg
aaaacaagcatgttcatcaaactgaacccacagttcaagggacatgtctgtggtctgtgt
ggaaactatgatggcaacgcaaacaatgacttcactaccaggagccaggcagtagttgtc
aaccctctagactttggaaacagctggaaagtctctgcaagctgccccgatgcaaagaac
aaaaggagcccctgtactgccaacccttacaggcagtcttggtcacagaagcagtgtagc
atcattcagagcaaagttttcacagactgccattctaaagtggacccctcttctttctat
gatgcgtgtgtgacagactcgtgtgcttgtgacagtggtggagactgtgagtgtttctgt
actgctgtggcagcttatgcagaggcctgtaatgaggctggagcctgcatagcctggaga
agcccacaaatctgcccactgttctgtgattactacaacccccctggagaatgtgagtgg
cactacaaggcatgtggagctcagtgtatgaagacctgcaggaatccctccgggagctgc
tcaactcagataccacctcttgaaggttgctatccaaaatgtcctcctgctcaacccttc
tttgatgaagatataatgaagtgtgtggagaaggagcagtgtggctgctatggcagagat
ggaaaacactacaataatggagaaaaagttccaaccacagaaaactgccagacatgctat
tgtaattcagtgacagtggactgcaaatacgatgtacaagcttgcacttgcacctacaat
gggaacaaatacccctatgggcatatcatatacgatacaacggatggacatagcagctgt
atgacagcagtttgtgggaagaatggaaccattcaaagggacatgtacacatgttcaact
acaactccatcaacttctattccatctcatccaactccatctacgaatgttcctaccact
acatcattctctacagtgacaacaaatgttttcactttctcaacaccaacgccaacacct
ctgaccacaactacaactccaacaaccacaacaacacccactactacgatcttgacatcg
cctgctccagctaccacatcaacaacaattccttcaaccacgactcctatacccactact
acaatcttaacttcgacagctccatctaccacaaaaacaacaactctgccttctactaca
actccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcactggt
gaagaaagttgtgtgtggtcagactggatcaaccttggtcagccaacctctggctctgaa
ggtggagataatgaatccattaagaacatcattgctagtggttatcacatttgctcagct
ccagaggcagttgaatgtagagcaaaacaataccctggacttcagatctctcagcttggc
caagacgtgacttgcaatccatccgttggactgatttgtaaaaacaatgagcaaggtctt
cagcaaaagtgcttcgattacgagatacgagtgaaatgttgtcaatgtcctcccacaaca
cacatcccgacaacaacaacaacaacaacaacagttctgtcgaccacgactcctacaccc
actactacaatcttaacttcaacagctccatctaccacaaaaacaacaactctgccttct
actacaactccaacctctactcctacaacaacaacaacaacagttctgtcgaccacgact
cctacacccactactacaatcttaacttcaacagctccatctaccacaaaaacaactact
ctgccttctactacaactccaacctctactcctacatcaacctcaacaggagcatcaact
acccagtgcactgttctgtcgaccacgactcctacacccactactacaatcttaacttca
acagctccatctaccacaaaaacaacaactctgccttctactacaactccaacctctact
cctacatcaacctcaacaggagcaacaacaacaacaacaacaacagttctgtcgaccacg
actcctacacccactactacaatcttaacttcaacagctccatctaccacaacacacatc
ccgacaacaacaacaacaacaacaacagttctgtcgaccacgactcctacacccactact
acaatcttaacttcaacagctccatctaccacaaaaacaacaactctgccttctactaca
actccaacctctactcctacaacaacaacaacagttctgtcgaccacgactcctacaccc
actactacaatcttaacttcaacagctccatctaccacaaaaacaacaactctgccttct
actacaactccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgc
actggtgaagaaagttgtgtgtgctccatctaccacaaaaacaacaactctgccttctac
tacaactccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcac
tgctccatctaccacaaaaacaactactctgccttctactacaactccaacctctactcc
tacatcaacctcaacaggagcatcaactacccagtgcactgctccatctaccacaaaaac
aactactctgccttctactacaactccaacctctactcctacatcaacctcaacaggagc
atcaactacccagtgcactgctccatctaccacaaaaacaacaactctgccttctactac
aactccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcactgc
tccatctaccacaaaaacaacaactctgccttctactacaactccaacctctactcctac
atcaacctcaacaggagcatcaactacccacaaaagtgcttcgattacgagatacgagtg
aaatgttgtcaatgtcctcccacaacacacatcccgacaacaacaacaacaacaacaaca
gttctgtcgaccacgactcctacacccactactacaatcccgacaacaacaacaacaaca
acaacagttctgtcgaccacgactcctacacccactactacaatcttaacttcaacagct
ccatctaccacaaaaacaactactctgccttctactacaactccaacctctactcctaca
tcaacctcaacaggagcatcaactacccagtgcactggtgaagaaagttgtgtgtggtca
gactggatcaaccttggtcagccaacctctggctctgaaggtggagataatgaatccatt
aagaacatcattgctagtggttatcacatttgctcagctccagaggcagttgaatgtaga
gcaaaacaataccctggacttcagatctctcagcttggccaagacgtgacttgcaatcca
tccgttggactgatttgtaaaaacaatgagcaaggtcttcagcaaaagtgcttcgattac
gagatacgagtgaaatgttgtcaatgtcctcccacaacacacatcccgacaacaacaaca
acaacaacaacagttctgtcgaccacgactcctacacccactactacaatcttaacttca
acagctccatctaccacaaaaacaacaactctgccttctactacaactccaacctctact
cctacaacaacaacaacaacaacagttctgtcgaccacgactcctacacccactactaca
atcttaacttcaacagctccatctaccacaaaaacaacaactctgccttctactacaact
ccaacctctactcctacaacacacatcccgacaacaacaacaacaacaacaacagttctg
tcgaccacgactcctacacccactactacaatcttaacttcgacagctccatctaccaca
aaaacaactactctgccttctactacaactccaacctctactcctacatcaacctcaaca
ggagcatcaactacccagtgcactggtgaagaaagttgtgtgtgctccatctaccacaaa
aacaacaactctgccttctactacaactccaacctctactcctacatcaacctcaacagg
agcatcaactacccagtgcactgctccatctaccacaaaaacaactactctgccttctac
tacaactccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcac
tgctccatctaccacaaaaacaacaactctgccttctactacaactccaacccctactcc
tacatcaacctcaacaggagcatcaactacccagtgcactgctccatctaccacaaaaac
aactactctgccttctactacaactccaacctctactcctacatcaacctcaacaggagc
atcaactacccagtgcactgctccatctaccacaaaaacaacaactctgccttctactac
aactccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcactgc
tccatctaccacaaaaacaactactctgccttctactacaactccaacctctactcctac
atcaacctcaacaggagcatcaactacccagtgcactgctccatctaccacaaaaacaac
aactctgccttctactacaactccaacctctactcctacatcaacctcaacaggagcatc
aactacccagtgcactgctccatctaccacaaaaacaactactctgccttctactacaac
tccaacctctactcctacatcaacctcaacaggagcatcaactacccagtgcactgctcc
atctaccacaaaaacaacaactctgccttctactacaactccaacctctactcctacatc
aacctcaacaggagcatcaactacccagtgcactgctccatctaccacaaaaacaactac
tctgccttctactacaactccaacctctactcctacatcaacctcaacaggagcatcaac
tacccagtgcactgctccatctaccacaaaaacaacaactctgccttctactacaactcc
aacctctactcctacatcaacctcaacaggagcatcaactacccagtgcactgctccatc
taccacaaaaacaactactctgccttctactacaactccaacctctactcctacatcaac
ctcaacaggagcatcaactacccagtgcactgctccatctaccacaaaaacaacaactct
gccttctactacaactccaacctctactcctacatcaacctcaacaggagcatcaactac
ccagtgcactgctccatctaccacaaaaacaactactctgccttctactacaactccaac
ctctactcctacatcaacctcaacaggagcatcaactacccagtgcactgctccatctac
cacaaaaacaacaactctgccttctactacaactccaacctctactcctacatcaacctc
aacaggagcatcaactacccagtgcactgctccatctaccacaaaaacaactactctgcc
ttctactacaactccaacctctactcctacatcaacctcaacaggagcatcaactaccca
gtgcactgctccatctaccacaaaaacaactactctgccttctactacaactccaacctc
tactcctacatcaacctcaacaggagcatcaactacccaacttgcaaagtagaaacccgt
tccttcagatgtgatgtaacaactaccccagttaccactacttcacccaccactacactg
ctcccaacaacaacaacaataccacatacaacagaaagaccaaccaccaccccaaaatct
acaattgagcaacactgtccccatgaacatcctccaagacagaacggtgacagctggaaa
cataaccagtgcaccaacggaacatgcgccaacgggaaagttatttatgagcatgtacat
tgtgagactccgaagccaatagcatgtgaaaataactatcctccgatcaaagtgtatgac
gaatctggatgttgtttccactatgagtgtcaatgtatctgctatggttggggagaccct
cactatgtcacctttgatggaacatactatggcttccaaggaaattgttcttacgtcttg
gtcaaagaaatcctgccaaagtacaacttcagtgttgtaatcgacaattactattgtgat
gccccagatggactttcctgtcctcagtctctgacaatttattaccaatcttacaagata
ttcatgaccaagaaggacgttgatggagttttcacaagtctgatttatgtaaaccagcaa
cgcatcatcccagcatatgagaccaaggacttccgcatcacagacaacggaattgagacc
cttttagtcataccagcaattaatgccaaggtgtctttcactggtcttatgtttagcata
tacctgccctgggaccagttcagtggcaacactgagggacagtgtggtacatgtgacaac
aaccggacagatgactgccgcttgccagatggaactatcgattcatcttgtccagacatg
gcacaccaatggcatgttgctgaccacaataacagtcagtgcacaccaccactaccacca
ccagaaccgacaccaacaccaccaacaggctgcgatccacccatttgtcatctcattcaa
agcaagtaa
DBGET
integrated database retrieval system
