Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412557
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Entry
139412557 CDS
T10872
Name
(RefSeq) cerebellin-4-like
KO
K23284
C1q-related factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139412557
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Opsonins
139412557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Tropomyosin
SlyX
CENP-F_leu_zip
HOOK
GAS
Rootletin
Uso1_p115_C
EDS1_EP
Rab11-FIP3
Cast
BclA_C
MAD
Mucin
bZIP_1
WIT1_2_N
UPF0242
DUF7310
DUF5446
Motif
Other DBs
NCBI-GeneID:
139412557
NCBI-ProteinID:
XP_071015383
LinkDB
All DBs
Position
7:complement(17498642..17501013)
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AA seq
320 aa
AA seq
DB search
MRGAVALLVLLLCRSGTRAQGESGGDRESLVESRGTGDTELTSKQTTGQTITTPDIWGEV
EELRDVVDNLGTMILEQREKMRNMEKKMERRWREKWRRGSEARLETMGARLSVIEREVED
LKEQNTAMGTRLSAGEREVEELKRINAALEARATDSENGNTALEARLNASEGMVEELRRE
NADRPKVAFSAGLTNDGYLGPFNSITTLVYRRVITNIGKAYNPNTGVFTAPVRGLYYIRF
TAMGLKGPQSIDAYIYHNDKSVMFNHQNNDNGRNRFLSNALTLELEAGDVVYMRLPVNQE
LYDEKSSNYSTFSGFLLFPM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgctgtagctctgctggtgttgctgctctgtcggtctgggacacgggctcag
ggagagagtggaggggatagagagagtttggtggagagccgcgggactggagatacagag
ttgactagcaaacagacgaccggccagaccatcacaacgcctgatatctggggtgaggta
gaggagcttagagacgtggtggataacctgggaaccatgattttggagcagagagagaag
atgaggaacatggagaaaaagatggaaagaaggtggagagaaaaatggcgaagaggatct
gaggccagactggagactatgggggccagactgagtgtcatcgagagggaggtagaggac
ttgaaagaacagaatacagccatgggcaccagactgagtgccggtgaaagggaggtggag
gagctgaagagaataaatgcagccctggaggccagagcgacagacagtgagaatgggaat
acagccttagaggccagactgaatgccagcgaggggatggtggaggagctgaggagagag
aatgcagacagaccaaaggtggccttctctgctggtttgactaatgatggatatttagga
ccctttaatagtatcaccacactagtatacagaagggtcatcaccaacatcggcaaggcc
tacaacccaaatacaggtgtcttcacagcaccagtgagaggactctactacatcagattc
actgccatgggtctcaagggtccacagtccatagatgcctatatttaccacaacgacaag
agtgtcatgttcaatcaccagaacaatgacaatgggcgtaataggttcttgtctaatgcg
ttgactctagagctggaggccggggatgtggtctacatgcgtctcccagtaaatcaggag
ctctatgatgaaaagtcgagtaactacagcaccttcagtggcttcctgctcttccctatg
tga
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