Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412613
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Entry
139412613 CDS
T10872
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139412613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139412613
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139412613
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Motif
Pfam:
HLH
Herpes_IE68
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
139412613
NCBI-ProteinID:
XP_071015408
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Position
7:complement(52825976..52827113)
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AA seq
177 aa
AA seq
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MGAKCIFDVCANVCPVTPVSPLSHHVVDIKDPSKETILLKLRKLVVEKIQRDRINSSIEQ
LRRLLHRGQMCGQQQQRLSKLEKADILELAVSFLQKETKTGVSPTYSQCLQETLRHLSLH
APLQAAEQQDIKRFYVLQKTALSRSMSSEQHAQSAAKRSTSRSSSRRFQGSLWRPWQ
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaaatgcatctttgatgtttgtgctaacgtgtgcccggttactcctgtttcc
cctctatctcaccacgtggtggacatcaaagatccgtcaaaggagactattttgctcaag
ttacggaagctcgttgtggagaaaattcagagagaccgcatcaacagcagcattgagcaa
ctgagaagacttctccacagaggacagatgtgtggacagcagcagcagcgcttatccaaa
ctggagaaagcggatattttggagttggccgtgagtttcttacagaaggagaccaaaacg
ggcgtttcgcccacctactcccagtgtctgcaggagaccctccgccacctgtcccttcac
gcgcccctgcaggctgcagaacaacaggatatcaaacgcttttacgtgctccagaaaaca
gccctgtccaggagcatgtcaagtgaacagcacgcgcagtctgcagccaagcggtcaaca
tcaaggtcatcatcacggcggttccaaggctctctgtggaggccatggcaatag
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