Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412681
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Entry
139412681 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139412681
04082 Neuroactive ligand signaling
139412681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139412681
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139412681
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
139412681
NCBI-ProteinID:
XP_071015442
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Position
7:complement(74669639..74677397)
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AA seq
542 aa
AA seq
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MMITNVWVKHEWNDYKLCWNPKEYENVTSMHIPSHLIWRPDIVLYNNADGDFSVTHLTKA
HLFHDGRIKWVPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDRTKIDLISMAGNVDQM
DYWESGEWVLVDAVGNYNIKKYECCHEVYSDITYSFIIRRLPLFYTINLIVPCLLISCLT
VLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVISLIGEYLLFTMIFVTLSI
SITIFVLNVHHRSPRTDTMPRWVRRVFLDVVPGFLFIRRPAAVKDNKKRLAEAMQKRAML
WGELEAELEVQEILARSPSLFLGRPMEGSLPPKLPQQQQQPLDKSSQYSILPEEPTTSSQ
PGCSPLFLHPLFPPRDKHHAARSKMRSLSLQYGLGEREQPQTSIRCRSRSIQYCCLHEEV
SSMGNGMQRPLSQHPSLMEERKQSCSAVCKYHSGLAKEAKAMTKDQRLLVLSPSMKMAME
GVQYIADHLRSEDIDFSVKQEWKYVAMVLDRIFLWLFILVCLLGTLGLFVPPWLAGMIDL
SV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaccaatgtctgggtgaaacatgagtggaatgactacaagctctgctggaat
ccaaaggaatacgagaatgtcacctccatgcacatcccatcccatctaatctggagacca
gatatagttctttacaacaatgcagatggtgatttctccgtgacccacctgaccaaggcc
cacctgttccacgacgggcgcatcaagtgggttcccccggcaatctacaagtcctcctgc
agcatcgacgtcaccttcttccctttcgaccagcagaactgcaccatgaagtttggctcg
tggacctacgaccgcaccaagatcgacctaatcagcatggcgggcaatgtggaccagatg
gactactgggaaagtggcgagtgggtgctggtggacgccgtgggcaactacaacatcaag
aagtacgagtgctgccacgaggtctactctgacatcacctattccttcatcatccgaagg
ctaccgctgttctacaccattaatctgatcgtgccctgtctgctgatctcctgcctgact
gtcctggtgttctatctgccctctgactgtggagagaagatcaccctgtgtatctctgtg
ttgctgtctctcaccgtcttcctcttgcttattaccgagatcatcccgtccacctcgctg
gtcatctcactcatcggggagtacctcctcttcaccatgatctttgtcaccctttccatc
agcatcaccatcttcgtgctcaacgtacaccaccgctcgccgcgcacagacaccatgccc
cgctgggtgcgccgcgtcttcctggacgttgtccccggcttcctgttcatccggcggcct
gccgcggtcaaggacaacaagaagaggctggcggaggccatgcagaagagggccatgcta
tggggtgagctggaggctgagctggaggtccaggagatcctggcccgctccccttctctc
ttcttgggccgacccatggagggttccctgccccccaagcttccccagcaacagcagcag
cccctggacaagtccagccagtactccatcctcccggaggagccgaccacctcgtcccag
ccaggctgctctcctctgttcctccaccctctcttcccgcccagggacaagcaccacgcg
gccaggtccaagatgcgttccctcagcttacagtacggcctgggtgagagggagcagccc
cagaccagcatccgctgtcgctcgcgcagcatccagtactgctgcctgcatgaggaggtc
tcctccatgggtaacggcatgcagcggcctctctctcagcacccgtccctgatggaggag
aggaagcagagctgctcagctgtctgcaagtatcactcaggcctggccaaggaagccaaa
gcaatgaccaaggaccagcggctcctcgtcttatccccgtccatgaagatggccatggaa
ggtgtgcagtacatcgcagaccacctccgttcggaggatatcgacttctctgtgaagcag
gagtggaagtacgtggctatggtcctagaccggatctttctgtggttgttcatcttggtg
tgtctcctggggaccctcggactcttcgtccctccctggctggctggaatgatagaccta
tctgtctga
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