Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412724
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Entry
139412724 CDS
T10872
Name
(RefSeq) transcription factor Dp-1-like
KO
K04683
transcription factor Dp-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
ocla04110
Cell cycle
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139412724
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139412724
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139412724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139412724
03036 Chromosome and associated proteins [BR:
ocla03036
]
139412724
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
139412724
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
139412724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
139412724
NCBI-ProteinID:
XP_071015494
LinkDB
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Position
7:complement(2866883..2879990)
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AA seq
405 aa
AA seq
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MAMDAAVIGANGEMKVFYNQNLSPSKGVLSLVTVHPQSLSVGKQLLPKTLGPSNVNIAPH
MVMGTPQRPSGSGGLVMGSPHTPSTQYRPQSQPPDASPWSTGKRGTGKKGDKNGKGLRHF
SMKVCEKVQKKGVTTYNEVADELVAEFSANDTLLSPGDSHSYDQKNIRRRVYDALNVLMA
MNIISKEKKEIRWIGLPTNSAQECQSLEVERQRRLERINQKQSQLQELILQQIAFKRLVQ
RNRTAEQQAGRAPPPNSVINLPFIIINTSKRTVIDCSISNDKFEYLFNFDNMFEIHDDIE
VLKRMGLACGLEVGQCSPEDLKEARTLVPRALEPYVTEMATGPISNVYITGALSTNGGGR
RHTSSSDGTVASISNDSHYSASRGHTPVSYMADEEEDDEDYDDND
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggatgcggctgtgatcggtgccaacggagagatgaaggttttctacaaccag
aacctcagtcccagcaaaggtgtcctgtccctggtgacagtccacccacagtctctctct
gtggggaaacaactgcttcccaaaaccctggggccctccaacgtcaacatcgccccacac
atggtgatgggtacccctcagaggcccagtgggtcaggggggttagtgatgggcagccct
cacacacccagtacccagtacagaccacagagccagccccctgatgcctctccctggtcc
accgggaagcgtggtactggtaagaagggggataagaacgggaagggtcttaggcatttc
tccatgaaggtgtgtgagaaggtgcagaagaagggagtaactacctacaatgaggtggct
gacgagctcgtggcagagttcagcgccaacgacaccctcctctcgcccggcgactcgcat
tcctatgaccagaagaacatccgacggcgtgtgtacgacgcgctcaacgtgctcatggcc
atgaacatcatctctaaagagaagaaagagatccggtggatcggcctgcccaccaactca
gcccaggagtgtcagagcctggaggtggagagacagagacgactagagaggatcaaccag
aaacagtctcagcttcaggagctcattctacagcaaatagcgttcaagcgcctggtgcag
cggaatcgtacagcggagcagcaagcgggcagggctccgcccccaaactctgtcatcaac
ctgcccttcatcatcatcaacacctccaagaggaccgtcatcgactgcagcatctccaac
gacaagtttgagtacctgttcaactttgacaacatgtttgagatccatgatgacattgag
gtgttgaagagaatgggtctggcctgtggtctggaggtgggccagtgttcaccagaggac
ctgaaggaagctcgtaccctggtgcccagagccctggagccctatgttacagaaatggcc
acgggtccaataagcaacgtctacatcacaggagccttgtctacaaacggagggggacgc
cgtcacacaagtagctccgatggcacggtggcgtccatttccaacgactcacactacagc
gcctcgcgaggccacacccctgtgtcctacatggcagacgaggaagaggatgacgaagac
tacgacgacaatgattaa
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