Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412803
Help
Entry
139412803 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139412803
09143 Cell growth and death
04210 Apoptosis
139412803
09144 Cellular community - eukaryotes
04530 Tight junction
139412803
04540 Gap junction
139412803
09142 Cell motility
04814 Motor proteins
139412803
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139412803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139412803
03036 Chromosome and associated proteins [BR:
ocla03036
]
139412803
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139412803
04147 Exosome [BR:
ocla04147
]
139412803
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139412803
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139412803
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139412803
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139412803
Exosomal proteins of other body fluids (saliva and urine)
139412803
Exosomal proteins of colorectal cancer cells
139412803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139412803
NCBI-ProteinID:
XP_071015626
LinkDB
All DBs
Position
7:complement(7154867..7162042)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGTMPNNKAVGSTDDSFTTFFSATGIGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIGNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctctgtgcatgtaggtcaggctggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcacgggatccagccggacggcaccatgcctaacaacaag
gcggtcggtagcactgacgactccttcaccacgttcttcagcgccacgggcatcgggaaa
tacgtgccccgcgccatctttgtagacctggagcccactgtcattgatgaggtgcggaca
ggtacctaccgccagctgtttcaccccgagcagctgatctcagggaaggaggatgcagcc
aataactatgcccgtggccactacactatcggcaaggagatcatcgaccaagtgctggac
aggatccgtaaactggctgaccagtgtacggggctccaaggtttcttggtcttccacagc
ttcggaggaggtaccggctctggtttcacctccctgctcatggagcgtctctcagtcgac
ttcgggaagaaatccaagctggagtttgccatataccctgctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtcgacaatgaggccatctacgacatctgccgtagaaacctggacattgag
cgcccctcttacaccaacctcaacaggctcatcagccagattgtctcctccatcacagcc
tctctccgcttcgatggtgcccttaatgtggacctgacagagttccagaccaacctggtg
ccttacccccgcatccactttcccctggccacctatgcccctgttatctcagccgagaag
gcctaccacgagcagctttctgtggctgagatcaccaactcctgcttcgagcccgccaac
cagatggtgaagtgcgaccctcgccacggtaagtacatggcgtgctgcctgctgtaccgc
ggagacgtggtgcccaaggatgtcaacgtggccatcggcaacatcaagacaaagcgaagc
atccagttcgtggactggtgccctacaggtttcaaagtgggcatcaactaccagccaccc
actgtggtgccagggggtgacctggccaaggtccagagagctgtgtgcatgttgagcaac
accacagccatcgctgaggcctgggcgcgtctcgaccacaagtttgacctgatgtatgcc
aagcgggcattcgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaggactatgaagaggttggaatcgactcattt
gaggaggacgaggagggagaggagtattag
DBGET
integrated database retrieval system
