Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412849
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Entry
139412849 CDS
T10872
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139412849
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139412849
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
139412849
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139412849
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GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
139412849
NCBI-ProteinID:
XP_071015696
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Position
7:complement(8762888..9364328)
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AA seq
567 aa
AA seq
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MTAMWRVRVVCCTLSMLSLSCGGDIKAKTCSDVRQAYTAKGFSLVNVPHQEMSGEHLRVC
PQGYTCCTSDMEEKLGQQSKLEFENLVEDTSQTLRTTLVSRHQQFDEFFLELLDNSEKSL
NNMFTRTYGKLYMQNSELFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
APACIRALTKMLYCPYCRGLPGLKPCHNYCHNVMRGCLANQADLDPEWNLFIDAMLLVAD
RLEGPFNIEAIMEPIDVKISEAIMTMQDNSMIVSAKVFQGCGQPKPSGMGSSRSARGISD
VFNARFRPYSPEERPTTAAGTSLDRLRTVWRTMQHSVLDIKKKLKQSKKFWSNLPDEICI
KDKLTESDEEQCWNSHAKARYFPEVVKDGLTNQLNNPEVAVDITRPDTLIRQQIMTLRVM
TNKLRNAYNGNDIFFQDSSDEGSGSSSGCTEGCTTEFVFVGPEAPVVGADRSDERASAAA
GSAPHPSRPSLPLLLTLSLTALSWSRR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatgtggagagtacgagtggtgtgttgcactttatcgatgctgtccctgtca
tgtggaggagatattaaagcgaaaacctgcagtgatgttagacaagcatataccgccaaa
gggttcagtcttgtcaatgtacctcatcaagaaatgtcaggtgaacacctgcgtgtgtgt
cctcagggctacacctgttgtacgtctgacatggaggagaaactggggcagcagagcaag
ctggagtttgaaaacctggtggaggacaccagtcaaacactcaggacaaccttggtgtcc
agacatcaacagtttgacgagtttttcctggagctcctcgacaacagtgagaaatccctg
aataacatgttcacgcggacctacgggaagctgtacatgcagaacagtgagctgttccag
gacctgttcacggagctgaagcgttactacactggggggaacgtcaacctggaggagatg
ctgaatgacttctggtcccgtctgctagagaggatgtttcagctgctgaactctcagtac
cacttcaccgacgactacttggagtgcgtcagtaaatacactgaccagctgaagcctttc
ggtgacgtaccccggaaactaaaggcacaggttacgagggccttcatcgctgcaaggacc
ttcgtccagggcctcatggtgggcagggaggtggctaacagggtggctaaggtgaatgtg
gcccccgcctgcatcagggccctgactaagatgctgtactgtccgtactgcaggggcctg
cctgggctgaagccctgtcataactactgccataatgtgatgagaggctgtctggctaac
caggctgacctagatcccgagtggaacctcttcatagatgccatgttgctggtagctgac
cggctggagggacccttcaacatcgaagccatcatggaacccatagatgtgaagatctct
gaagcaatcatgaccatgcaagacaacagcatgatagtttcagctaaggtgttccagggg
tgtggtcagcccaagccgtctgggatgggcagcagcagatcagccagggggatctctgat
gtcttcaacgcccgattcagaccctacagcccagaggagagacccaccacggccgctggc
accagcctggacagactgaggacagtgtggaggacaatgcaacacagcgtgctagacatt
aagaagaagctgaagcagtccaaaaagttctggtccaacctgccagatgagatctgtatt
aaagacaagttgaccgagtcagatgaagagcagtgttggaacagtcacgccaaggccagg
tattttcctgaggtggtaaaggacggcctcaccaaccagctgaacaacccagaggtggcg
gtggacatcactagaccggacactctgattcgccaacagatcatgacactcagagtgatg
accaacaagctgagaaacgcctacaacggcaacgacatcttctttcaggactccagtgac
gagggcagtggcagcagcagtggctgtacagagggatgtaccacagagtttgtgtttgtg
ggtccagaggcccccgtggtgggagcagacaggagtgatgagcgagcttcggctgcagca
ggcagcgccccacatccctccagaccctctctacccctgctactgaccctctctctcaca
gccctgtcctggtccaggagataa
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