Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412860
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Entry
139412860 CDS
T10872
Name
(RefSeq) titin homolog
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139412860
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
139412860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Motif
Other DBs
NCBI-GeneID:
139412860
NCBI-ProteinID:
XP_071015709
LinkDB
All DBs
Position
7:10264739..10318074
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AA seq
2216 aa
AA seq
DB search
MPGLTRNWVFWVVSAILLTGYFDTDASHGVAMDRGLVVKHLKSQDPSGISRQLESDEGLE
ALTHKTYKGKGAISRRKRNILFPSGVKLCSQETVDQAIENHLKYFHQRVCQETVWEAFKI
FWDRLPERDEYQAWVNLCQDGTVSVMEIGSNFSRSEEHVSLVRARVVMTAAPNSEPTSSG
SKVCSPTAATPPELATTQKDNEVIVIQPDTFPTLRGDVDIIPVITAEPVEEVTEMVPPET
TDSVTEDADIDVTSETDETIQEIGEDATTEAAFDVNSEKAVEVFAETSDEVNMAAVEESS
DATSDDTVEITSEPIVTVIHEPINEVIGKMDEEVISDTTHNTVEEAEEAAAEVPPEVAIE
IPAEVPSEAAIDMPVGSTDKDIPEPEITFIPETSLEAISETPSEAPSEAATEITSDTIDK
EITEGATEITSDTIDKEITEGATEITSDTIDKEITEGATEITSDTIDKEITEGATEITSD
TIDKEITEGTTEITSDTIDKHITEGTTEITLDTIDKEITEGTTEITSDTIDKEITGGTTE
ITSDTIDKEITEGTKEITSDIRDKEITEGAIEITSDTIDKEITEGATEITSDTIDKEITE
GTTEITSETIDKEITEGATEITSDTIDEEIKEAAIEVTSDTTDEEITEAAVEENVTLETT
SDIATKATSEDTTDEDIPEDAAELTPEVSPGDTSVPEAAMEIPSEGSDGDVQELPMETTS
EATVNVAPEDTEEETPEILEEVISVATTHLILEATEEITPESVLEDTVATTTNEVVIEIG
PEEEVTPETSVKAIPEDVTGTTEEATIKAEVTPEAEVEMKEVMVEVTSEATLEVTPEVEV
EVTPEYVVEEPPEAEEITEETAVEDNPEVEIEVTPESTEEVPEEAEEVILETAVEDTPEA
VEEIPPDTVEITLEAAEEDSTETVEEIVSVTPEEITPEPSEEEIPEPSEEEIPETSEEEI
PEPSEEETPEASEEVPSEAVDEIIPEATEGASKKTITETTEEASEEIILEPSEVAAEITT
EAAGESTPEATQEAAVEITHEITTETGILTDTEENNNGDRYKDAEENNNSDRYRVTEETN
DDFLGIQDIITEVENTLGNEIEDIMTRPSTPMKEQVVELSIQLKGENYNDALRDPSSFYY
QRVAKHFTHKIEGAFERLPGFKKVFVVEFRPQKDLQRGILSVVVHYAVTMEVDGAGISNE
TMDYINLQSNVVEKSYRDAIERPTVVYTITDFRNYITEALHKENFMSNTTLDVDPDSLQL
ERVDNLFLGGRPTTKPEESNDMMDNVLAAEKPPDAPGQDLDVSDIFLKKDDFLFPVDPLK
GSGSVVASENDVFVLDETTLPPSTTAVPAENNGNIEEEGFLLSNTQQDSDTPDGDGVVGA
GGSSTSSPSQPQTTEAPVPTPPRVNPDLDVGSGSGFSGDDQGADVLPWFPVTTEETDYIE
EEEEDSVVGEVHFPDPEVEPKEEEKKDEEKGEEITESVLTESPEDMGPFESHPESAPVEE
EPQWHFLDRLPVTQDISTRPDYTTTAEVPVFWTAETLTVELSIQTLEASGIYDDYYPSEP
FTIIAPVTDYPYPQFYTTEALVLEGPAAETHGSVEELSEPTSPIEVELPTVTESPTFIDM
ELFTVKESIFDMITSEPPEIEAFTDRPLLLVPDPEDEDGEVEILEEQGAEVAGLLATLLP
ALDISEEDLAEDQIFVVAAGTAAPEVIESHSILSPEKESPFSRISDSVPEEEEATHHPAT
TEIAPLGGIEISETPEIAPIILPPFFQPTFRPTENLPEAAEESDVSIEEGDVSMALAPPS
PAHDTYELEVGTSIQAVGDYAPDSPMSEIDLTFNVYDGTSHTDGDSSGYSSIAHGSDVGS
IAMAKSPGKDLMVFFSLRVTNMMFSEDLFNKSSTEYKALEQRFLELLIPYLQSNLSNFQN
LEILNFRNGSIVVNSRMKFGKPVSLGVTNTVYLILEDFANSAFQTMNLAIDKYSLDVESG
NQANPCKFQACNEYSMCTVNRWSGEAECVCDAGYFSVDGLPCQSICDLQEDFCLNDGKCD
VIPGKGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGAIFFLARTLR
DGYDKEDSEDPLRDRDSVPSLERATKFNPMYESDVATAEYYRRYEDDVPHHSTGSADPSV
DFCSDEILQIYDNSELTREQIQDRLRIIELCAKDRQFADFVRQHQVALDRRVSSET
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctaacgaggaactgggttttttgggttgtgtctgccattcttctgacagga
tactttgacacggatgcttcgcatggggttgctatggatagaggtttggtagtgaaacac
ttgaaatctcaagacccctctgggatttcaagacaactggagtcagatgaaggtctggag
gccttgacccacaagacatacaaaggaaagggtgctatttctagaagaaagcggaatatt
ctttttcccagtggagtgaagctttgttctcaagagactgtagaccaagcaatagaaaac
catctgaagtactttcaccagcgagtgtgtcaggagacggtgtgggaggcgttcaagatc
ttctgggaccgtctacctgagagagatgagtaccaggcctgggttaacttatgtcaggat
ggaactgtcagcgtgatggagattggcagcaacttcagccgatcagaggagcacgtctct
cttgttagggctagagtggtgatgactgctgctccgaatagcgagcccacaagctcaggg
tccaaagtgtgcagtccaaccgcggcgactccaccagaattggccaccacccaaaaagat
aatgaagtcattgtcatacagccagacaccttcccaaccttgcgaggagatgttgacatc
attcctgtcattactgcagagccagttgaggaggtcacagagatggtcccgccagaaact
actgactctgtgactgaagatgctgacatcgacgtcacctcagagaccgacgagacaata
caggagataggagaggacgccactaccgaagctgcctttgacgtcaactccgaaaaagca
gttgaagtctttgctgagactagtgatgaggttaatatggctgctgttgaggaatcatcc
gatgctacctcagatgacactgtggagatcacatctgaacctattgtcactgtcatccac
gagcccattaatgaggtaattgggaaaatggatgaggaagttatctcagataccacacac
aatacagtggaggaggcagaagaggccgctgcagaggtcccaccagaagttgccattgag
atccctgcagaggtcccttcagaagctgccatcgatatgcctgttgggtccacagacaag
gatatcccagaacctgaaataacatttattccagaaacttctttggaggccatttctgaa
accccttctgaagcgccttcggaggctgccacagaaatcacttcagataccatagacaag
gagatcacagagggtgccacagaaatcacttcagataccatagacaaggagatcacagag
ggtgccacagaaatcacttcagataccatagacaaggagatcacagagggtgccacagaa
atcacttcagataccatagacaaggagatcacagagggtgctacagaaatcacatcagat
accatagacaaggagatcacagagggtactacagaaatcacttcagacaccatagacaag
catatcacagagggtactacagaaatcactttagataccatagacaaggagatcacagag
ggtactacagaaatcacttcagataccatagacaaggagatcacagggggtactacagaa
atcacttcagataccatagacaaggagatcacagagggtactaaagaaatcacttcagat
atcagagacaaggagatcacagagggtgctatagaaatcacatcagataccatagacaag
gagatcacagagggcgctacagaaatcacatcagataccatagacaaggagatcacagag
ggtaccacagaaatcacatcagaaaccatagacaaggagatcacagagggtgccacagaa
atcacttcagacaccatagatgaggagattaaagaggctgccatagaggtcacttcagat
accacagatgaggagatcacagaagctgcggtagaagaaaacgtcactttggagaccact
tcagacattgctaccaaggcaacgtcagaagatactacagatgaggatattccagaggat
gcagcagaattaactccagaagtttctccaggggacacttcagtgcctgaagctgccatg
gagatcccttcagagggttcagatggagatgttcaggagctccccatggagaccacctca
gaggctacagtaaatgttgccccagaagacactgaagaggagacccctgagattttagag
gaagttatctcagtcgccacaacgcatttgatactcgaggctacggaggagatcactcca
gagagtgtactagaggatactgtagccactactactaatgaagtggtaatagaaattggt
cctgaggaagaagtcactccagaaacttcagtaaaggccattccagaggatgtaacaggg
accactgaagaagcaacaataaaggctgaagtcactcctgaggctgaagtagagatgaag
gaagttatggtggaggtcacctcagaagccactttggaggtcactcctgaggtggaagta
gaggtaactccagaatatgtagtggaggaacctccagaggctgaggagattacagaagaa
actgcagtagaggacaatcccgaggtggagatagaggtaactccagagtctactgaagaa
gttcctgaggaagcagaagaggtcattttggagactgcagtggaagacactccagaggct
gtagaagaaatccccccagatactgtagagataactctggaagctgctgaagaggactca
acagaaactgtagaagaaatagtttcagtgactccagaagagataacaccagaaccttca
gaggaggaaattccagaaccttcagaggaggaaattccagaaacttcagaggaggaaatt
ccagaaccttcagaggaggaaactccagaggcttcagaagaggtcccatctgaggcagta
gacgagatcattccagaagctacagaaggggcttccaaaaagacaattactgaaactaca
gaagaggcttccgaagagatcattctagagccttcagaagttgcagcggagataaccaca
gaggctgcaggtgagtccactccagaggcgacacaggaggctgctgtggagattactcat
gagattaccactgaaactggaattttgacggacacagaggagaacaataatggtgatcgt
tataaggatgcagaggagaacaataacagtgatcgttatagggtcacagaagaaacaaat
gatgacttcctagggatccaagatatcataacagaggtggaaaacacgctgggcaatgag
atcgaggacatcatgacgaggccgtccacacccatgaaggagcaggtggtagaactcagc
atccagctgaagggagagaactacaacgacgccctgagagacccctctagcttctactac
caacgcgtggccaaacatttcacccataagattgaaggtgcatttgaaaggttaccagga
ttcaagaaggtctttgtagttgaattcaggcctcagaaggacctccaaaggggtatcttg
tctgtggtagtccactacgcagtgactatggaagtggacggggcaggcatcagtaacgag
accatggactacatcaacctccagtccaacgtggtggagaagtcttaccgtgacgccatt
gaacgccccactgtggtctacaccataacagacttccgaaactacatcactgaagccctg
cacaaggagaacttcatgagcaacaccactctggatgtagaccctgactcactgcagcta
gagcgagttgataacttgtttctgggagggagacccaccaccaaaccagaagagtccaat
gacatgatggacaatgttctggctgctgagaaaccaccagatgctcctggccaagacttg
gatgtcagcgacatcttcctgaagaaggatgatttcctgtttcctgtggaccctttgaaa
ggctccgggagcgttgtggccagtgaaaatgatgtgtttgttctggatgaaaccaccttg
ccacccagcaccacggctgtccctgcagagaataatggaaatattgaagaagagggattt
cttctcagcaacactcagcaagactctgatactcccgatggggatggtgtggtcggtgct
ggaggctcctctacctcctccccttcacaaccacagaccacagaggccccggtcccgaca
cctcccagagtaaacccagatttggatgttggctctggctccggcttctctggggatgac
caaggggctgacgtcctcccatggtttcccgtgacaactgaggagacagactacatagag
gaggaggaggaggattctgtggtgggggaggtgcattttccagatccagaagtggaacca
aaggaggaagagaagaaggatgaggagaagggggaagagatcaccgaatctgtcctgact
gaatctccagaagatatgggtccttttgagtcccatccagaatctgccccagttgaagaa
gagccacaatggcatttcttggacaggctgcctgtgacccaagacattagtacccgacct
gactacacgaccaccgctgaagtccctgtgttctggaccgcagagaccctgacagtggag
ctctccatacagacgctggaggcctctgggatttatgacgattattacccaagcgaacca
ttcaccatcatagcaccagtcactgattatccctatcctcagttttacaccactgaggcc
ctggtgttggaagggccagcagctgagacccatggttctgttgaggagctgtcagagcca
accagtccaatagaggttgaactccccacagtcactgagtcacctaccttcatagacatg
gagctgttcacagtcaaggagtccatcttcgatatgatcacctccgaaccaccagagatc
gaagccttcaccgacagacctttactcttggtgcccgatcctgaagatgaagatggagag
gtggagatcttggaggaacagggggcggaggtcgcagggctattggccacactactccca
gcccttgacatctcagaggaggaccttgctgaagatcaaatctttgttgtggctgcaggt
acagcagccccggaagtcatagagtctcatagcatcttatcccccgagaaggaatctccc
ttctctcgtatatctgactctgtaccagaagaggaggaagccacacaccatccagccacc
acagaaatagcaccacttggtggcattgaaatctctgagacacctgaaattgccccaata
atcctacctccattcttccagcccacattcagacccacagaaaacctgcctgaggcagca
gaagagtcagatgttagcattgaagaaggagatgttagcatggcgctagcacccccttcc
ccagctcacgacacatacgaactagaagtcggcacttcaatccaagcggttggagactac
gcaccagactcacccatgtcggaaattgacctcaccttcaacgtgtatgacggaacgagt
cacacggacggggacagcagcgggtactccagcatcgcccacggatcagacgtgggcagc
atcgccatggcgaaaagccctggcaaggatctgatggtgttcttcagcctgagggtgacc
aacatgatgttctctgaggatctcttcaacaagagttccacagagtacaaagccctggag
cagaggttcctcgaactgctcatcccttacttgcagtctaacctcagcaacttccagaac
ctggagatcctgaatttccgtaacggcagcatcgtggtgaacagcaggatgaagtttggg
aagcccgtctctctgggggtcaccaatactgtgtaccttatcctagaggactttgctaac
tcagccttccaaaccatgaacctcgccatagacaaatactcactggatgtggaatcaggc
aaccaggcaaacccctgcaagttccaagcgtgtaatgagtattcgatgtgcacggtgaac
cgctggtccggggaggcggagtgtgtgtgtgacgcgggttacttcagcgtggacggactg
ccgtgccagagtatctgtgacctgcaggaggacttctgtctcaacgatgggaagtgtgat
gtcatccctggcaagggagccatctgcagatgtcgtgttggagagaattggtggtaccgc
ggggaacactgtgaggagtatgtgtcagaacctctggtggtgggcatcgccatagcgtcg
gtggctggattcctattggtggcctctggggcaatcttcttcctggccaggactctgagg
gacggttatgacaaagaggattcagaggatcctctacgagatcgggacagtgtgccatcc
ttagagagagccaccaagttcaaccccatgtatgagagtgatgtggccacggcagagtac
tacagacggtacgaagacgatgtgccgcaccacagtacgggcagcgcagacccctctgtg
gacttctgcagtgacgagatactccaaatctacgacaactccgagctcaccagagagcaa
attcaggaccgcctaaggataattgagttgtgtgccaaagaccgtcagtttgcagacttt
gtacggcagcatcaagtagcgctggacagaagagtgagctctgaaacatag
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integrated database retrieval system
