Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412878
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Entry
139412878 CDS
T10872
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139412878
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139412878
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
139412878
Protein phosphatases and associated proteins [BR:
ocla01009
]
HAD phosphatases
Fcp/Scp phosphatases
139412878
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139412878
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
139412878
NCBI-ProteinID:
XP_071015776
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Position
7:12052322..12062598
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AA seq
258 aa
AA seq
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MDHQSSIITQVSRDEEANREKGPPPSSSKKPRSRGLFHSLFCCLCHDQAEPLPVNNNAPL
LVEENGTVSKVQVRPLLPQAKSKDAGKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGT
VHQVYVLKRPHVDEFLKRMGELFECILFTASLAKYADPVSDLLDKWGAFRGRLFRESCVF
HRGNYVKDLSRLGRDLNKVIIIDNSPASYVFHPDNAVPVASWFDDMADTELLDLIPFFEG
LSKVEDVYTVLRQQRDSS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaccaccagtcctcaataatcacgcaagttagtcgagatgaagaggcgaatagagag
aagggtcccccaccctcgtcgtctaaaaagcccaggagtcgaggcctgttccacagcctc
ttctgctgcctatgtcatgaccaggctgagcccctgccggtcaacaacaacgccccgcta
ctggttgaggagaacgggactgtctccaaggtccaggtcagaccgctgcttcctcaggcc
aagtcaaaagacgcagggaagatctgtgttgtcatagacctggatgaaacactggtccac
agctcattcaagccggtgaacaatgctgattttatcattcctgtagagatcgatggaact
gttcatcaggtatatgtgttgaagcgacctcacgtggatgagttccttaagaggatggga
gagctgtttgaatgtattctgttcacagctagcctggctaagtatgctgacccagtgtca
gacctgctggataagtggggcgcgttccgcggccgtctgttccgtgagtcgtgtgtgttc
caccgggggaactacgtgaaggacctgagtcgtctgggcagggacctgaacaaggtcatc
atcatagacaactccccagcctcctacgtcttccacccagacaacgctgtgcctgtggcg
tcgtggttcgatgacatggccgacaccgagctcctggatctaatccccttcttcgaaggg
ctcagtaaagtggaggatgtctacacggtgctcaggcaacagagggactccagctag
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