Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412920
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Entry
139412920 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 7-like isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139412920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139412920
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139412920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_9
SH3_1
CH
PH
SOS1_NGEF_PH
DH_Alsin
DUF7491
AsnC_trans_reg
Motif
Other DBs
NCBI-GeneID:
139412920
NCBI-ProteinID:
XP_071015894
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All DBs
Position
7:complement(13730222..13772033)
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AA seq
869 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEGFLQSSLKDGVVLCKLVERLRPGSVEKIFQEP
RNDSEFQSNIKEFLKGCGSFRVEPFEVNDLLQGLNFTKVLNSLVALAKATEDIGVGSDSV
CAHHSSSLRIKSFDSLNTQSPRGRSSKLLHNQYRSLDMSESGGQRVLVRAKFTFQQTNED
ELSFNKGDMISVSRQEDGGWWEGSFNGNKGWFPSNYVKEVKGSDNPVSPKSGTLKNPVKG
FDTPAVSKTYYNLVLQNILETETEYSKELQSLLTSYLHSLQPTDKLSSADVSHILGNLED
ISTFQLMLVQSYEECTRLPESQQRVGGFFLNLLPQMKALYMAYCSNHPSAVNILTEHSEE
LGEFMEGKGASSPGILTLTTGLSKPFMRLDKYPTLLKELERHMEEHHPDRPDIQKCLTSF
KSLSAQCQEVRKRKELELQILTETVRRWEGDDIRTLGPVLYMSHILCHTHGSEEKSERYL
LLFPNVLLLLSASSRMSGFIYQDKLPLTGMLISRIEDCELVKNAFEISGSTCERMQVVCN
NQQDLQEWVEHLSRHTQIRNAPSVIMTTPTAKPQSVPCHTLPSHPLTPSRHSESRGVSAG
PAYHTLPHPSSHGVPQTPPMWGPLEPPSTPKPWSLSCLRPAPPLKPSAALCYKEDLSKSP
KSMKKLLPKRKPERKASDEDFATRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSTWQGT
DLMHNHVLAEPVDRSSVDTIGCRSSLSRGTEPWSDLSEDSDYDSIWTASSYRTSSVSRSR
EKSGLHLLFPEEEKIIVEETKSNGQTVIEEKTLVDTVYGLKDEVQELKQDNKKMRRTLDE
EQKARKELEKILRRVLKNMNDPTWDETNL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacagacggtaacgtggctgataacgttgggggtcttggagtcaccg
aaaaagacaatttctgaccctgaaggtttcctgcagtcttctctcaaagatggggttgtc
ctgtgcaagctggtggagcgattgcgccctggttctgttgagaaaatcttccaagaacca
aggaatgatagtgagttccagagcaatataaaggagtttctgaaaggctgcgggtccttc
cgagtggagccatttgaggtcaatgaccttctccagggactgaacttcaccaaggtgctc
aactctctggtggcactggccaaggccaccgaggacataggagtgggcagtgactctgtg
tgtgcgcatcactcatcctcgttacggatcaagtcgtttgactctctgaacactcagtct
ccccgcgggcgctcctccaagctcctccacaaccagtaccgcagcctggacatgtcggag
agcggtgggcagcgggtactggtgagggccaagttcaccttccagcagaccaatgaagac
gagctgtccttcaacaagggtgacatgatcagtgtgtcgcgccaggaagacggcggctgg
tgggagggctcgttcaatggcaacaagggctggttccctagcaactatgtcaaggaggtc
aaaggcagcgacaacccagtgtctcctaagtctggcaccctcaaaaaccctgtgaaaggc
tttgacacaccagctgtcagcaagacctactataacctggtgctccagaacattctagag
accgagaccgagtattccaaggagctccaaagcctactgacctcatacctgcactcactg
caacccacagacaagttgagcagtgcagacgtcagtcacatcctggggaatctggaggac
atctctaccttccagctgatgttggttcagtcctacgaggaatgtaccaggcttccagag
agccagcagagagtagggggcttcttcctcaacctgctgccccagatgaaggctctctac
atggcctactgctccaaccacccctcagctgtcaacatcctcacagaacacagtgaggag
ctgggggagtttatggaggggaagggagccagtagtccaggtatcctgaccctcaccact
ggtctcagtaaacccttcatgaggctggacaaataccctacactgctgaaggaactggag
agacacatggaggagcatcatcctgatcgaccagacatccagaagtgtttgacctccttc
aaaagcctctctgctcagtgtcaggaggtgaggaaacgtaaggagctggagctgcagatt
ctaactgagacggtcagacgctgggagggagatgacatcagaaccctgggccctgtcctg
tacatgtcacacatactctgccacacacacggatcagaggagaagagtgaacgctacctc
ctgctgttcccaaatgttctcctactgctgtctgccagctccagaatgagtggattcatc
taccaggataagctgccattgacaggaatgcttatctcaaggatagaagattgtgagttg
gtcaaaaacgctttcgaaatatcaggcagtacgtgtgagcggatgcaggtggtgtgtaac
aaccagcaggatttgcaggagtgggtggagcatctgtcgagacacactcagatcagaaac
gccccctccgtgatcatgaccacaccaaccgccaagccccagtctgtcccctgccacacg
ctcccgtcccatcccctgaccccctccagacactcagagagtaggggtgtatctgcgggc
cctgcctaccacaccctaccccacccctcctcccacggggtccctcaaaccccccccatg
tggggtcccctggagccccccagcacccccaaaccctggagcctcagctgcctccgcccc
gcgcccccacttaagccctcggcagcactctgctataaagaggatctgagtaaaagtcct
aagagtatgaagaagctgctgcctaagcgtaagcctgagaggaaagcttcagatgaggac
tttgctaccaggaagagtactgcagctctggaggaggatgcccagatcctgaaagtgatc
gaggcctactgcaccagcgccaaaacacgacagacactcaactcaacatggcagggtact
gatttgatgcataaccacgtgctggccgagccagttgaccggtccagtgtggacactata
ggttgccgtagcagcctgtccagagggaccgagccctggtctgacctatcagaggactcg
gattatgacagtatttggaccgccagtagttacaggacctcctccgtttctcgatccagg
gagaagtcaggtctgcacttgctcttccctgaggaggagaagatcatcgtggaggagacc
aagagcaacggacagactgtcatcgaggagaagactctagtagacacggtgtacgggctg
aaggatgaagtgcaggagctgaaacaggacaacaagaaaatgaggaggaccctggatgaa
gagcagaaagccaggaaggagctggagaagatcctgaggagagtcctgaagaacatgaat
gaccccacctgggacgagaccaacctgtga
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