Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139412921
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Entry
139412921 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ocla03012
]
139412921
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-5
139412921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
Sec23_helical
Motif
Other DBs
NCBI-GeneID:
139412921
NCBI-ProteinID:
XP_071015896
LinkDB
All DBs
Position
7:complement(13773727..13788339)
Genome browser
AA seq
1268 aa
AA seq
DB search
MGKKQKKSGDDSAKDGGIDLDALAAEIEGAGASKEQGKGKAKKKKDKKKDDFDEDDILKE
LEELSLETTGARGSKKPDATDEPESAAEPPPPTKAEKKKTRKGKRASLEDDDRDDEEVSG
TGVVEDEDKQKDKKTSAAPAAAAAAGSDSEDDASRTRRKPKAGKKGVHKVASDEEEEDDD
GGARKGEGGGEDDSDDDDSFDASQAGKKGKKKKGKAKADSEEEEEEEGTFKMKTAAQKKA
EKKERDRKKKEEDRAKLKKQKEKEEEKEGSIEVAAVPKKEKEVVKKSEPAVAPAAAPTPA
AAPTPAAAPTPAAAPTPAAAPTPAAAPTPAAAPAAETEAAAEIEDQEGADPQGEEEEGVD
KKGKKDKKKKKGDKEKEEKKKGPSKATVKAMQEALAHMKEEEERAKKEEEENLRRLEEQE
AQRLEQERLEQERKEKKKQKEKERKERLKKEGKLLTKAQKEARARAEATLELLKAQGIEV
PSKDDSVPKKKPVYGDKRKKKPQQAQTPEEISEVMSPTSEMAEPIISPMAVETPKVAAEV
EQKAESAVDDWEAIAETIDQDKELKTVHIEVKPETPKHPQQKPSSQPEEEEDDEEEDEEE
EDDEEEESEEEEKESQPHTTQQAPATKRKGGKESSESSSDSDSDDDRTKEERIYDKAKKR
IEKRRAENIKNINLDKLRSPVVCVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATN
VPLEAIVEQTKMVKNFNNEAIKIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHG
LEPQTLESINLLKEKKCPFIVALNKIDRLYDWKKSPDTDVVATLKKQKKNTKDEFDERAK
AVIVEFAQQGLNAALFHENKDPRTFVSLVPTSAHSGDGMGNLIALLVELTQTMLARRLAH
CDELRAQVMEVKALPGMGTTIDVILINGVLREGMTVIVPGVEGPIVTQIRGLLLPPPMKE
LRVKNQYEKHKEVCTAQGVKILGKDLEKTLAGLPLLVAHKEDEVAVLRDELVRELKQTLN
SIKLEEKGVYVQASTLGSLEALLEFLRVSKVPYAGINIGPVHKKDVMKASTMLEHDPQYA
TILAFDVKVERDSQEMADSLGVRVFSAEIIYHLFDAFTKYREDYKKAKQDEFKHVAVFPT
KLKILPQFIFNSRDPIVMGVNVEAGVLRQGTPLCVPSKGFVDIGIVTSIEINHKMVDSAK
KGQEICIKIEPIPGEAPKMFGRHFEATDILVSKITRASIDALKNWFRDEMGKSDWQLIME
LKKTFEII
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagaaaaagtcaggcgatgacagtgccaaagacggtggaatcgacctt
gacgccctagcagcagaaatcgaaggagcgggagcctccaaggagcaaggtaaaggaaag
gccaagaagaagaaagacaaaaagaaagatgattttgatgaagacgacatcctgaaggag
ctggaggaactgtctcttgaaaccacaggagctagaggcagcaagaaaccagacgccaca
gacgagccggagagtgccgccgagcccccgccgcccaccaaagcggagaagaagaagacg
cggaagggcaagcgagccagcctggaggatgacgacagggacgacgaagaggtttcgggt
acgggtgtcgtggaagacgaagacaagcagaaggacaagaagacgtctgctgcccccgct
gctgctgctgctgctggctcagactcggaggacgacgcctcacggacccggaggaaaccc
aaggcagggaagaagggagtccacaaggtggcctcggacgaggaagaggaggatgacgat
ggaggtgcgaggaaaggagaggggggaggggaggatgattcagatgatgacgactctttt
gacgcatcgcaggctggaaagaaaggcaagaagaagaagggcaaagccaaggcagacagt
gaagaagaggaagaggaggagggaaccttcaagatgaagacggcagctcagaagaaggca
gagaagaaggagagagaccgcaagaagaaagaggaggacagggctaagctgaagaagcag
aaggagaaggaggaggagaaagaggggagtattgaggttgcagcagtgcctaagaaagag
aaagaggtagtgaagaagagtgagccagcggtggccccagcagcggccccaaccccagca
gcggccccaaccccagcagcggccccaaccccagcagcagccccaaccccagcagcagcc
ccaaccccagcagcagccccaaccccagcagcagccccagcagcagagacggaggcagca
gcagagattgaagatcaggaaggggctgatcctcaaggagaggaagaggaaggggtagac
aagaagggcaagaaagacaagaagaagaagaagggggacaaggagaaagaggagaagaag
aagggacccagcaaggccacagtgaaagccatgcaggaggctctggctcacatgaaggag
gaagaggagcgcgccaagaaggaggaagaggagaacctgcgtcgcctggaagagcaggag
gctcagagactggagcaggagcgtctggaacaggagcgcaaggagaagaagaaacagaag
gagaaagagaggaaggagaggctgaagaaggagggcaaactgctgaccaaagcccagaaa
gaggcccgggccagggcagaggccacacttgaactcctgaaggcccagggtattgaagtg
ccatccaaagacgactcggtgccaaagaagaagccagtgtacggagacaagaggaaaaag
aagccccaacaagcacagacccctgaagagatctcagaggtcatgtcacccacgtcggag
atggcagagccaatcatctcaccgatggccgtggaaactcccaaagtagcagcagaggta
gagcagaaagctgagtctgcagttgatgactgggaggctatcgctgagaccatcgatcag
gacaaagagctgaagacggtccacattgaggtgaagccagagacaccaaagcatccccaa
cagaaaccctcgtcacagccggaggaagaggaggacgacgaggaagaggacgaggaggaa
gaggatgacgaagaggaggagagtgaggaggaagagaaggagagtcagcctcacacaacg
cagcaggccccagccactaagaggaagggagggaaggagagctcagagtccagtagtgac
agcgactcagatgacgatcgcactaaagaggagcggatctacgacaaggccaagaagcgt
attgagaaacggcgagcagagaacataaagaacataaacctggacaagctccgctccccc
gtcgtctgtgtactgggccacgtagacacaggcaagaccaagatcctggacaagctgagg
catacacacgtacaggacggagaggcaggagggatcacccaacagatcggagccactaac
gtaccgctggaggccatcgtagagcagaccaagatggtgaagaacttcaacaacgaggcc
attaaaatcccaggaatgctgatcatcgacaccccaggccacgagtctttcagtaacctg
aggaaccggggcagctctctgtgtgacatagccatcctggtggtggacatcatgcacggc
ctggagcctcagaccctggagtccatcaacctgctcaaggagaagaagtgtcccttcatt
gtagcacttaacaagattgaccgtctgtacgactggaagaagagtccggacacagacgtg
gtggccacactgaagaagcagaagaagaacaccaaggatgagtttgacgagagggccaaa
gctgtcatcgttgagttcgcccagcagggtctgaacgcagccctcttccatgagaacaag
gacccgaggacctttgtgtctctggtgcccacctcggcccactccggggacggcatgggc
aacctgatcgctctgctggtggagctcacccagaccatgctggcacgacgcctggcacac
tgcgacgagctcagggctcaggtcatggaggtgaaagccctgcctggtatgggcaccact
atagacgtgatcctgatcaacggggttctccgggagggcatgaccgtcatcgtaccgggg
gtggagggacccatcgtcacccagatcagggggctgctgctgcctccacccatgaaggag
ctcagggtcaagaaccagtatgagaagcataaggaggtgtgtacggcccagggagtgaag
atcctggggaaagatctggagaagaccctggcagggctccccctgctggtggcccacaag
gaggatgaggtggcggtgctcagggatgagctggtgcgggagctgaaacagactctgaac
tccatcaagctggaggagaagggtgtgtacgtccaggcctccactctcggatccctggaa
gccttgctcgagttcctacgagtgtccaaagtgccttacgctggcatcaacatcggtcca
gtccacaagaaagacgtgatgaaagcttccactatgctggagcatgacccacagtatgca
acgatcctggcgtttgatgtgaaggtggagagggactctcaggagatggctgatagtctg
ggggtcagggtgttcagcgctgagatcatctaccatctgtttgatgccttcaccaagtac
agagaggactacaagaaggccaagcaggacgagttcaaacacgttgctgtgttccccact
aagctgaagatcctgcctcagttcatcttcaattctagagaccccatagtcatgggagtc
aacgtggaggctggggtcctcagacagggaaccccactctgtgtgcccagcaaggggttt
gtggacattggcatcgtgaccagtattgagatcaaccacaagatggtggacagtgccaag
aagggccaggagatctgtataaagatcgaaccgatccccggagaggcacccaagatgttc
ggccgacactttgaggccaccgacatcctcgtcagcaagatcaccagagcgtccatcgat
gccctgaagaactggttcagagacgagatgggcaaatctgactggcagctcatcatggag
ctcaagaagacttttgaaatcatctga
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