Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413048
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Entry
139413048 CDS
T10872
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413048
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139413048
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
139413048
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
139413048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
Sec7-like_HUS
Adaptin_N
Cnd1
RTP1_C1
MMS19_C
HEAT_DAAF5
ParcG
Paxt-1_C
KH_DEAH11_1st
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
139413048
NCBI-ProteinID:
XP_071016162
LinkDB
All DBs
Position
7:21126593..21166581
Genome browser
AA seq
1611 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMEILTALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NYDDDDSVDGGRSSSSKGPSSGKKAVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVSTMELFSNREMEEAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFDG
FSQQLRLTEAAFKMSSKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTSSCQSKSVAVRRRCFEFLDLLLQEWQTNSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAERLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAAPSRGPSTPGSLQRSRSDV
DVNAAATASAKTRMTPVPASPAPFSAASALPPGSYASLDNTPGNFRPVGRVRTRRTSSGS
GVGASPSVIDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRISRATAGTTPAERRPKVP
RSHGCSRDTSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRST
SALHSAESVGHSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPV
RRRYESPGIYSDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDVQ
DWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLK
VKVAILRYIECLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSWAGEELS
GRPSTTVASLPGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHS
HLRNSSNTRVASPSSTMGRTPPPPRHPSSRSSPLTSPTNCSHGGLSPSRLWGWSADGLSK
YPPPFPSPLSSTPAAPSLKTLRSAYSPSMLEYDTENLNTDQIYSSLRGVTEAIQNFSFRS
QEDLMEPGRGKREDTPGVGTASLSGADVVEGPGGRTALDNKTSLLNTPSPRSFSGPRARD
YNPYNYSDTISAYDKAALRETVYEDDVEQLRDGRQECGGENKMLHTKNSSPAEQLGLVGE
LLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETLSDQDHTIRALA
LRVLKEILRNQPARFKNYAELTIMKTLELHKDSHKEVVRAAEESASTLAGSIHPEQCIKV
LCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVF
CLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtcggaga
ctacaggtgggccaagacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggaaatactgacagctttggtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtccgagaccaggaccaagctcttctgctaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggacccgggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctacagacacgtcggggag
agggtgcggatggacctggggaaaaagggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaacgatcggggaacatgatcctgtccccagtctcagataag
aactatgatgatgatgattcggtggacggggggcggtcctcctcttctaagggcccctcg
tcagggaagaaggcagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgtgccttcgaggaagtgtccactatggaacttttctctaacagggaaatggag
gaggccatgaccaagatcagggaggtgctggctgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctgctcctggcgggagcggtggagtttgacggt
ttctcccagcagctgcgtctcacggaggcagccttcaagatgtcctctaaagacctgcgc
tctcaggtggtcagagaggcttgtatcactctgggccacctgtcctacatcctggggaac
aggtttgaccactgtgcagagtccatcatgcccactctcctaaccctggtctctaactcg
gccaaggtcatggccacatccggcatcgctgtcatacgactcatcatcaggcatacacac
taccctcgtctcattcctatcgtgaccagcagctgccagtcgaaatctgtggccgtaaga
aggcgctgttttgagtttttggacctcttgctgcaggagtggcagaccaactctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgag
gccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcggctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacgaaa
gcggctccctccagaggtccctccaccccgggctctctccagcgttcccgtagcgacgtg
gacgtgaacgctgctgccaccgctagtgccaaaaccaggatgactcccgtgcccgcatcg
cccgcccccttcagcgctgcctcggctctgccacccggctcctatgcctctctagacaac
acacctggtaactttagaccagtgggccgtgtgcgtaccaggagaacgagttcggggagc
ggcgtgggggcgagtccctctgtcatagacagtagggggaggagtcgagccaaaatggtg
tcagtgtctcaacctggcagtcgttctggctcccctggtcgtctcctgagccatacatac
ggcaggatctccagggccactgcagggacaacgccagcagaaaggaggcctaaagtcccc
cgcagccatggctgcagccgagacaccagtccagacagatcaggcctggcgaggagtcgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagagagagcagccga
gataccagccccgctcggggattctctcctctggcatccagacgtgtctcccgctccacc
agtgctctccactcggctgagtctgtgggccactcagagcgtctaggtctggcccaccag
gcccgtatctcagcctctgtcaacgccatgaggatcctcaacaccggtaccgaggtggag
gcagctgtagccgacgccctgttactaggcgacgcgaggaacaacaagcggcggccagtc
agacggcggtacgagtccccggggatctactcagacgacgacgctaacagcgatgccagc
agcgcctgctctgagcgctcatatggctcgcggaacggcggcccgccccactacatgaga
cagacggaggacgtggccgaggtgctgaaccactgtgccagttccaactggtctgagagg
aaggaggggctgctgggactacagaacctgctcgttagccagagaattctcagtcgtgtg
gagctgaagcgattgtgtgagatcttcacaaggatgtttgctgacccacacagcaaggtg
ttcagcatgtttctggagaccctggtagacttcatcaccctgcacagagaggacgtgcag
gactggctgtttgtcctgctcacccagctgctgaagaagatgggagctgacctcctgggt
tcagtacaggccaaggtccagaaggctctggacgtcaccagggactcgttcccattcgac
cagcagtttaacatcctgatgcgtttcatcgtggaccagacccagacccccaacctgaag
gtcaaggtggccatcctgaggtacattgagtgcctggcccgtcaaatggaccccgcagac
tttgtcaactccagcgagacgcgcctggccgtctcccgcatcatcacctggaccacggaa
ccaaagagctccgacgtccggaagagcttccaccatagctgggcaggtgaggagttgtca
ggcaggcccagcaccaccgtagcctctctacctggagaggggaacgtggaggagaggtgc
aagcaggcggctcaggtggttctgatcgccttgtttgagctgaacaccccagagttcacc
atgctgctgggggccctgcccaagaccttccaggacggagccactaaactgctgcatagc
cacctgcggaactccagcaacaccagagtggcttctcccagtagcaccatgggacgtact
cctcccccacctcgccaccccagcagtcgcagcagccccctcacctctcccaccaactgc
tcccatggggggctctctcccagccggctatggggttggagtgctgatggcctgtcaaag
tacccccctcccttcccttctcctctctcctccacccctgctgccccctccctcaagacc
ctacggagtgcttactctcccagcatgttggagtacgacacagagaacctgaacaccgat
cagatctatagctccctgcgaggcgtcactgaggccatccagaacttcagcttccgcagt
caggaggacctcatggagccgggcagaggcaagagagaggacacgccgggtgttggaaca
gcatcactctctggtgccgacgtggtggaggggcccgggggtcgcacggccctggacaac
aagacctctctactcaacaccccctccccccgttccttctccggcccccgggcccgcgac
tacaacccctacaactactctgacaccatcagcgcctacgacaaggctgccctgagagag
acggtgtacgaggacgacgtggagcagcttcgagatggccgccaagagtgtggtggagaa
aacaagatgctgcacaccaagaacagttcccctgcggagcagctgggactggtgggtgag
ctgctgaaggagctgtctaaccccagtgagaggccagaggagaggaggggagccctggtg
gagctgctgaagatagcccgggaggacagcctggcagtgtgggaggaacacttcaaaacc
atgctgctcctgctgctagagactctgtcagaccaagatcacaccattcgggcactggcg
ctacgagtgctgaaggagatcttacgcaaccagccggcccgcttcaagaactacgcagaa
ctcaccatcatgaagaccctggagctacacaaagactcccacaaagaggttgtgcgggca
gcagaggagtccgcctccaccctggccggctccatccacccagaacagtgtatcaaggtg
ctgtgtcccatcgtccagacggctgactaccccatcaacctggcttccatcaagatgcag
accaaggtgatcgaacgcatcaccaaggagtccctgcaccagctgctgcctgacatcata
ccaggactactgcagggatatgacaacacagagagcagtgtgaggaaggccagtgtgttc
tgtctggtggctgtctactctgtcattggtgaagagctgaagccctacctggcccagctc
acaggaagcaagatgaagctgctgaacctgtacataaagagagcccagacgtccaccagc
aacagtagcagctcctcagacatctcctcatactaa
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