Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413059
Help
Entry
139413059 CDS
T10872
Name
(RefSeq) small COPII coat GTPase SAR1B-like
KO
K07953
GTP-binding protein SAR1 [EC:3.6.5.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139413059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413059
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139413059
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
139413059
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Sar
139413059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
SRPRB
G-alpha
Roc
Ras
MMR_HSR1
RXYLT1_N
Motif
Other DBs
NCBI-GeneID:
139413059
NCBI-ProteinID:
XP_071016183
LinkDB
All DBs
Position
1:79881352..79887268
Genome browser
AA seq
198 aa
AA seq
DB search
MSFIFNWIYRGLSGVLQLLGLYKKSGKLVFLGLDNAGKTTLLHMLRDDRLGQHVPTLHPT
SEELTIAGMTFTTFDLGGHTQARRIWKNYLPAINGIVYMVDSADHERLQEAKIELDALLT
DDTISNVPVLILGNKIDRPEAISEDALRGMFGLIGHTTGKGNVSLKELNLRPMEIFMCSV
LKRQGYGDGFRWLSQYID
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttatatttaactggatctacagaggcctcagtggtgtgctgcagttactaggt
ttatataagaagtctgggaaactggtgttccttggtttggacaatgctgggaaaacaacg
ctactgcacatgctcagagatgaccgactgggacagcatgtgccaacactacaccccaca
tcagaagagctgaccattgctgggatgacattcacaacatttgatcttggtggtcacaca
caagccaggagaatctggaagaactacctcccagctataaacggtatagtctacatggtg
gattcggcagaccatgagagactacaagaagccaaaattgaactggatgcgctgttaaca
gacgacaccatctccaacgtgcctgtacttatcctggggaataagatcgaccgtccagag
gccatcagtgaagacgcactcagagggatgttcgggctcattggacacactactggaaag
ggtaatgtgtcactgaaggagctgaacctgaggcccatggagatcttcatgtgcagtgtt
ctgaagagacagggatatggagatggtttccgctggctctcacagtacattgactga
DBGET
integrated database retrieval system
