Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413064
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Entry
139413064 CDS
T10872
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139413064
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139413064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
139413064
NCBI-ProteinID:
XP_071016193
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All DBs
Position
7:complement(22113848..22184123)
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AA seq
734 aa
AA seq
DB search
MTEGRAGVKQPRNQPRFFTMEGDEEERMSSSSTDVKENRNLDNVGSSTKEGLGGEGAAHL
PNGGSAGCGGGRKRPLEEGNNGHHNNKYRPKKRKKMPGPILPKNALMQLNEIKPGLQYKL
LSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNSAEKALRSFVQFPNASEAHMAMGR
TLTVNTDFTSDQADFPDMLFNGFETPAPPEESFYLGSNGTNGSFSSLGLVAYPLLGNSGA
TALSQSSLGLPPTSSVPAFVSPAIAKNPVMILNELRPGLKYDFVSESGESHAKNFAMSVV
VDTQTFQGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREGLQLHLPQVLADAVS
GLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVTTGTKCINGEYMSDRGL
ALNDCHAEIIARRSLLRYLYAQLEHFLSNNREEQQKSMFTRCENKRGFRLKDNVQFHLYI
STSPCGDARIFSPHEAAFEDQGDRHPNRKARGQLRTKIESGEGTIPVKVSNTIQTWDGVL
QGERLLTMSCSDKIARWNVVGIQGSLMCYFTEPIYFSSIILGSLYHADHLSRAMYQRIAD
IEDLPQTFNLNRPLLSGISNAEARQPGKAPNFSVNWAVGDQGLEVINAMTGKDDLGRPSR
LCKHALYSRWVRLYCKLSQTLRIKGAKPSLYHDAKQAAMEYHAAKQTLTKEFHKAGLGAW
VKKPIEQDQFSLQS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggtcgagctggtgtgaagcagccccgtaaccagccaaggttcttcaccatg
gagggagatgaagaagagcgcatgagttccagcagcaccgacgttaaggaaaaccgcaac
ctggacaacgtgggctcctccaccaaggaggggttggggggtgagggggcagctcacctc
cctaatgggggcagtgcagggtgtggagggggcagaaagcgtcccttagaagagggtaat
aacgggcatcacaataacaagtacaggcccaagaagcgtaagaaaatgcccgggcccatt
ctgcccaaaaatgccctgatgcagctgaatgaaatcaagcctggactgcagtacaagctg
ctgtctcagaccggtccggtccacgcgcccgtgttcgtcatgactgtcgaggtcaatggg
cagctgttcgagggctccggccccaccaagaagaaggctaagctcaactcagctgagaag
gctctgcggtcgttcgttcagttccccaacgcctccgaggcgcacatggcaatgggtcgg
acgctaacggtcaacacagactttacctccgaccaggctgacttcccggacatgttgttt
aatgggtttgagaccccggcccctccggaggagtccttctacctgggttctaacggtacc
aatggctccttcagctccctgggactagtagcataccccctgctagggaactcaggtgct
accgccctgagtcagtcctcgttaggcctaccacccacctcctccgtcccggccttcgtc
tcccccgctattgccaagaaccctgtcatgatcctcaacgaactacgacccgggctgaag
tacgactttgtgtcagagagtggagagagccacgccaagaactttgccatgtccgtggtg
gtggacacgcagacgttccaaggctcaggccgcaataagaagctggccaaggcccgtgcg
gcacaagctgctctctctgccctctttaacatgcaactggaccagacaccgtccagacag
cccatacccagagagggcctgcaactgcacctgccacaggttctagctgatgctgtgtcc
ggtctggtagttgacaagttcagtgagctgacggataacttcacatcccctcacgcacga
cggaaagtcctagcaggcgttgtcatgacaacaggcaccgatgtcaaggaggcacaagtg
atctgtgttaccacggggaccaagtgtataaacggcgagtacatgagtgaccgcggcctg
gctttgaacgactgccatgctgagatcattgctcgtcgttccctccttaggtacctgtac
gcacagctggaacacttcctcagtaacaacagagaggagcagcagaagtcgatgttcacg
aggtgcgagaacaagcggggcttccgtctgaaggacaacgtgcagttccacctgtacatc
agcacgtcgccctgcggagatgcacgcatcttctcaccccacgaggctgccttcgaggat
cagggagacaggcaccctaacaggaaagctcgtggtcagctgaggaccaagatagagtct
ggggaggggaccatccctgtgaaagtcagtaacactatccagacctgggacggggtactg
cagggagagcggctgctcaccatgtcctgcagtgacaagatcgccaggtggaacgtagta
gggatccagggctctctgatgtgttacttcacagagcccatctacttctccagcattatc
ctgggaagcttgtaccacgcagaccacctctccagagccatgtaccagaggatcgctgac
attgaggacctgcctcagacgttcaacctcaaccggccacttctgagcggaataagcaac
gcagaagcacggcaaccgggtaaagcgcctaacttcagtgtgaactgggctgtgggagac
caggggttagaggttatcaacgccatgacaggcaaggacgacttgggacggccctcgagg
ctctgcaagcacgccctctacagccgctgggtgcgcctatactgcaagctttcacagact
ctgcgaatcaaaggtgccaaacccagcttgtaccatgacgccaaacaggcagcgatggag
taccatgctgccaagcagactctgaccaaggaattccacaaggcaggactgggagcctgg
gtcaagaagcctatcgaacaggaccagttctcactccagtcctga
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