Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413079
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Entry
139413079 CDS
T10872
Name
(RefSeq) SH3 domain-binding protein 4-A-like
KO
K20066
SH3 domain-binding protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413079
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
139413079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPA_SH3BP4
SH3BP4_C
DEATH_SH3BP4
SH3_2
SH3_1
SH3_9
ZU5
Pox_RNA_Pol_22
Motif
Other DBs
NCBI-GeneID:
139413079
NCBI-ProteinID:
XP_071016223
LinkDB
All DBs
Position
7:22792538..22819497
Genome browser
AA seq
981 aa
AA seq
DB search
MAAHRIIRGTNSNHVLPRCKSEGTLIDLNEGLSEASLTDVKVPSSSALRLDNSASLVTAR
EVVAIKDYCSSSFTTLKFSKGDRLYVMDTSGGEWWYAHNNTEMGYIPSAYVQPINCRNSS
LGDSGMIDNLGECTDEVAKELDLLGEWTGVSVKTTPYSPYFNSNPFSLHTSSTNPFINSA
HLRGSLDQNCNERGRSTDLLVFDSLESSVSPSVPNSTSSNTMINGFSNCNIFDMMTSTST
NQDLHVLQALRRDNPFFRSKRSYSLSELSVLQTQSNPPLPSSGFFTGLKAPSPEQFQSRE
DFRTAWLNHRKLARSCHDLDSLGQSPGWGQTQPVETNIVCKLDSRGGAVQLPDTQISVHV
PEGHVGPEDTQQISMKALLDPPLELNNDHCSTVSPVVEIKLSNMDTKSFITLEMTVSVTV
KKDSGQVAEVLCVRSDCKEGPYIIIPHAYLYKDTVQVQLDNLEPCMYVVVVVQAQHVNLN
TTVWDNVLKKVTLGVYGPKHIHPSFKTVVALFGHDCAPNTLLVSEVGKQAHSAPPVALTL
WGKHQFFLGRPQDLQVGLYSNMSNYMIKANEQARIIRGFQVKLGKVSRLIYMITSNNPEE
ISDFTLQVQVKDCLDCILAQFCVQTPQPPPKSVARNSGQRRFLKKKEVVGKILLSPLAIT
AKYPQFQERCITNLKFGKLLKTVIRQNKSTYLLEYKKGDVIALLSEEKIKLRGQLWTKEW
YIGYYQGKTGLVHAKNVLVLGKVKPIYFCGPDLTTTMLVEQILKPCKFLTYIYASVRTVL
MENIGNWKAFADALGYGNLPLSCFCRTEPDNEPEKVASVLEKLKEDCTNMDIKERKTFQK
ELMTALLKMDCQGLVARLIMDFVLLTTAVEVAPRWRELAEKLARVNKQQMEQYEAPHRDK
NGLVDNESMWKPAYDFLLTWAAQIGDSYRDVIQELHLGLDRMKNPITKRWKHLTGTLILV
NSLDTLRSSAFSPVGQGDYAI
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaccggatcatcagagggaccaacagtaaccatgttctccctcgctgcaaa
tcggagggcacgctcattgatctcaacgaagggctctctgaggctagcctcacagatgtc
aaagtgccttcttccagtgccttacggctggacaattcagcctccctcgtaactgctcgt
gaagtcgtcgccatcaaggattactgctcgtctagctttaccacgttaaagttttccaaa
ggtgaccggctttatgtgatggacacgtcgggtggagagtggtggtatgcccacaacaac
acagagatgggctacatcccctcagcatatgtccagcccatcaactgtagaaactcgtcg
ctcggtgatagtggcatgatagacaatctaggggagtgtacagacgaagtggctaaggag
ctggatctcctaggggagtggacaggggtgtccgttaagaccactccttattcgccttat
tttaacagcaaccccttctccctccatacctcctccaccaaccccttcatcaacagtgct
catctacgtggttctctggaccagaactgtaatgagaggggaaggtccacggacctgctc
gtctttgactccttggaatcgtcagtctccccctcggtacctaactctacctccagcaac
accatgatcaatggcttcagtaactgcaacatctttgatatgatgacatccaccagcacc
aaccaggacctacatgttttacaggcactgcgaagggataacccattcttcaggagcaag
cgatcgtacagtttatcagagttgtccgtcctacagacgcaatccaacccccctttgcct
tcttccgggttcttcactggcctcaaggctccctcgccagagcagtttcagagcagggag
gatttcaggactgcgtggctaaaccatcggaagctggccagatcttgccatgacctggac
tctctggggcagagccctggttggggacagactcagccggtggagaccaacattgtctgt
aaactagacagtcgtggaggggccgttcagctcccagacacccagatcagcgtccatgtc
cctgagggacacgtgggtcctgaagacacccagcagatctccatgaaggccctactggac
cctccactggagctgaacaatgaccactgctccacggtcagcccagtggtggaaatcaaa
ctgtccaacatggataccaagtccttcatcactctggagatgactgtgtccgtgacggtg
aagaaagacagcggtcaggtagccgaggtgctctgcgtccggagtgactgcaaggaggga
ccctatataatcatcccacatgcctacctatacaaggacacagtacaagtccagttggat
aacttggagccgtgtatgtacgtggtggtagtggtgcaggcccagcacgtcaaccttaat
acaactgtatgggacaatgtgttgaagaaagtcaccctgggtgtctatgggcccaagcac
atccatccttcgttcaagacggttgtggccctatttgggcatgactgtgcccctaacacc
ctactggtgagtgaggtggggaagcaggcccactccgcccctccagtggcgctcacgctg
tgggggaagcatcagttttttctgggacggccccaggacctccaggttggtctatactcc
aacatgtctaactatatgatcaaggctaatgagcaagcccggattattcggggcttccag
gtcaaactggggaaggttagccgactcatttacatgatcacatccaacaaccctgaagag
atctcagacttcaccttgcaggtccaggtcaaagattgcttggactgtatcctggctcag
ttctgcgtccaaacaccgcaaccgcctccaaagagtgtagcgcggaactccggccaaagg
aggttcctgaagaagaaagaggtggtgggtaagattcttctgtcacctctggccatcact
gccaaatatccacagtttcaggagcgctgcatcaccaacctgaagtttggcaagttgctc
aaaactgtgatcaggcaaaacaagagcacatacctgttggaatacaagaagggagacgtg
atcgccttgctgagtgaggagaaaatcaaactacgaggacaactgtggaccaaagagtgg
tatattggatattatcagggaaagaccggtcttgttcacgcgaaaaacgttctggttttg
gggaaagtcaagcctatttatttctgtggtccggacctcacaacaaccatgctagtggag
cagattttgaagccttgtaaattcctcacatacatctacgcctctgtgaggacagtactc
atggagaatatagggaactggaaggcctttgcagacgcactgggatatgggaacttacct
ttgtcttgtttctgtcggactgaaccggacaacgagcctgagaaggttgcctcggttctg
gagaagctcaaggaggactgcactaacatggacatcaaggagagaaagaccttccagaag
gaactcatgacagccctgttgaagatggactgccagggtctggtggccaggctgatcatg
gactttgtcctgctgaccacggccgtggaggtggccccgcgctggagggagctggctgag
aagctggcccgggtaaacaagcagcagatggagcaatatgaggctccgcacagggacaag
aacggcctggtggacaatgagtcaatgtggaagccagcctatgacttcctgctgacctgg
gcggcccaaattggggacagctaccgggacgtgatccaggagctgcacctgggcctggac
cggatgaagaatcctataaccaagcgctggaagcacctcaccggaaccctcattctggtc
aacagcctagatacgttacgcagctctgccttcagccctgtaggacagggggactatgcc
atttga
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