Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413087
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Entry
139413087 CDS
T10872
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413087
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
139413087
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
139413087
NCBI-ProteinID:
XP_071016236
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Position
7:23942294..23961046
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AA seq
1274 aa
AA seq
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MEAHEEKPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPRESMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWSAF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVYVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKVPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRMRSARLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFCQEILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAMQVEQLAATLHFSLEQGGARGRAGSAQRKTGQGPQGQGDGVVL
FPQGSPLAGAGMGASLPPALELYEMQDRSPSDSSLTSTGVVCKNMHLLLRRHNSSASLDT
PTAGALPAAVTVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFV
QSHIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYSVKKGDALQLSNTDS
MPILHSSCCSATVLSSTGERMGESALSIQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPP
TPFKPDIERLTNGEVRHRPKSHSHADSGMINIDQKVSIDCPWSIYSTLIALTFYVPFKAK
HSILSAGKRKYIQVCLQNVSDTNFHLADPVLTERQPTVSMELLSLNVKKQQPVCSQQSVF
CLWEMRWAKPLPLCLQCAFSASFAPVSASDTHTAFKPYRYEFQLDRVSTLYSLKAEILPP
SGDQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCG
KSSGVVSMPVAASATHRVQMEVMPLFAGHLPFPNIKVFKYLPHNAVPAIQPDTDSCLEND
TISLLDKGLDDQGDTASIRSRGSVHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLV
LPVTDDHVMEVNVT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcatgaagaaaagccaataatctacactatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttctctctacacctctctggcacagcagttaccc
agggagtccatggagtggaggaggtcctacggacgtgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctacttcctaaggatggaaacagagccctgctc
acctttcccttcctgcacatatactggacagactgttgtgacactgagatgtacaaggca
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctgcacggttcggtggac
tggctcattgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtggacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtcggaccctctgaaggagtcgtctcggtcccaggattcgtggagcgccttc
ctgaccaagctgcgcaccttgctactcatgtccttcaccaagaacctgggccgtttcgag
gatgacatgcgcactctccgcgagaaacgcactgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgcc
ctggtccagtacgacgagctggacgctctcttcactcagtatgtcctcaactttggggct
ggagacggggccaactggctgggctcgttctgtgccccggtgaagcgctggagcgggctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgtggcgaagccagc
ctgctggacctgcgcagctacttgttctcccgccagtgtaccctgctcatcttcctccag
aggccctgggaggtcacccagcgagccctggagctgctgcacaattgcgtccaggagctg
cgcctgctcgaggtgtatgtggtccagggggcgttggactgctgggtgttcctcagctgt
ctggaagtgctccacaggatcgagggctgctgcgaccgcgcccagctagaggccaactgc
tcccacactgtcggcttgtggacctacgccacggagaagctaaagtctctgggctacctg
tgtggcctcgtggccgagaaggtccccacctccgaggacctaaaccgcaccgtggacctt
ttggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
catgctgctatggagatgtacagagccataggcaggatgcgctcagcccgactcattggg
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagggcttcctt
gatgactctctgaggtcatacgtggcagaggggtggagcctgcaggtgactcataccagg
aagcagatggccgagtgtcagaagctcctgcagcagactgaagactacctgcagaccagt
gccttgctggcgggcgacgccaacctgacagaggaggagaggaagcacttctgccaggag
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcgttcgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgcgtgcgctgcctgatgcctgtggccatgcaggtg
gagcagctggctgccactctccacttcagcctggagcagggcggggcgaggggccgtgcg
ggtagcgcccagaggaagacaggccagggaccacaaggccagggggacggggtggtcctg
ttcccccagggaagccccctagctggggccgggatgggagcttcgctaccccccgccctg
gagctttacgaaatgcaggaccgcagcccgtcggacagctcgctcacctccacgggggtg
gtgtgtaagaacatgcacctgctgctgcggcgccacaacagctccgcctccctagacacg
cccaccgccggggccctcccggcagcggtcaccgtggacgacggggcccagatgttgagg
gcacgcgacataacgctgcagcccggcgacaacagcatattgttcacggccccgactgga
gagccgggctcatacacgttacgtcagctgtgcgggagcgtggggagagtccagtttgtc
cagtctcacatctaccctgtggtgcagtacgaggtctactcccaggagcctcagctcacc
atcgagcccctctcagacaacctgttagcaggcattccccagaaggtgaagttcaccata
gcaacaggccactacagtgtgaagaagggtgacgcgttgcagcttagcaatacagactcc
atgcccatcctccactctagctgctgctctgctactgtcctgtccagcacgggagagcgc
atgggggagagtgctctttctatccagtcatcggagaaggtgaccagcatttccctgccc
ccaacccctccctaccacaccctggagttccagctggaggtgctgtgccacatccccccc
acgcccttcaagcccgacatcgagcgtctcaccaacggcgaggtccgccaccggcccaag
agccacagccacgcagacagtggcatgatcaacatcgaccaaaaggtctccatcgactgt
ccttggtccatctactccacgctcatagccctaaccttctatgtccctttcaaagccaag
cactcaatactctctgctgggaaaaggaagtacatacaggtgtgtctccagaacgtgtcc
gacacaaacttccacctggcggacccggtcctcacagagcgccagcccacagtctcgatg
gagctgctctcactcaatgttaaaaagcaacagccggtgtgcagtcagcagtcagtgttc
tgcctgtgggagatgcgttgggccaaacccctcccgctgtgcctgcagtgtgcattctcc
gccagcttcgcgcccgtctccgcctcggacacacacacagccttcaaaccctaccgctac
gagttccagctggaccgggtctctaccctttacagcttgaaggccgagatcttgccgcct
tccggggaccagcactgtcgcaccggcgccctctgtggcctcgaggtgtccatcacacgg
caggcggagcccagcgagactgaaggggaggaggaggagtctacggaaatagagggcctg
aggaccaccaagctcatgtatgaagtggtggacaacagcagtaactgggcggtgtgtggc
aagagctcgggggtggtgtccatgcccgtggctgccagcgccacacacagggttcagatg
gaggtcatgcccctgttcgccggtcacctgcccttccccaacatcaaagtgttcaagtac
ctgccccacaatgccgttccagccattcagcccgacacggacagctgcttagagaacgac
accatttccctgctggacaaagggctggacgaccagggcgacacggccagcatccgcagc
cggggcagcgtccactcggtgggcagcggggagcagcagaggggtctgcccatgccccgg
ctggagcccttcagtccgggacaggtgttctattggagccaggggcggcaggtgctggtg
ctgcccgttactgatgatcacgtgatggaggttaacgtcacatga
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