Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413122
Help
Entry
139413122 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139413122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139413122
NCBI-ProteinID:
XP_071016300
LinkDB
All DBs
Position
7:complement(25662142..25687705)
Genome browser
AA seq
962 aa
AA seq
DB search
MTRVFCAFAGVMMVFRIILLCIMELHTGCDAVLAAGLTTFRAFAPPAQEGVVRTVDRIYH
GGGKVGYLLYMDGRKFQLDMERDESILSHHFSPKYVMALMGAGEDAAPLHRECVYRGTVD
SNPESLAVFSLCGGGLEGFFALKHARYTITLLIRTKGHDNDVRSLDDKDAKSALHYFTRE
RFSFEAMPVSESCGTKEGRGRMDASRKHRRKGRGNGKRDRYGVTLDRGEERSRAHGRRWW
TQLSKPASPPSLGSRRKRSVSRARHVELLLVADESMSKKYGKDLHHYLLTLASIASKLYG
HASIENPIRLSVVKVTMVTEKEKGLDVSKNAAATLKSFCKWQNQQNPLDDDNQHHHDAAI
LFTRQDLCGHHSCDTLGMADVGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLSHDDS
KFCEERFGASADKRLMSSILTSIDASKPWSRCTSATITDFFDDGNAECLLDSPRQPLLGS
EELPGQSYDAVRQCRLAFGPEYTVCPGMDVCARLWCAVIRQGQMVCLTKKLPAVEGTPCG
KGRICLQGKCVDKTRKRHYSASNHGSWSSWGPWGACSRTCGGGVQFAQRLCNNPPPRNNG
RYCTGKRAIYKSCSVTPCPSPSKSFRQEQCELRNGPQTDPKGVKTFVEWVPKFAGVLPKD
VCKLTCRAKGTGYYVVFSQRVADGTECRPYSSSVCVKGKCVRTGCDGIIGSKLQFDKCGI
CGGDSTGCIRVIGNFTKKSKGYTDVVKIPAGSTHIKVRQHKPKDQPRYTAYLALRRPSGD
YLLNGKFMISTSETVIPLNGSVLNYSGWSQRDEWLHSMGPGALREALTVQILATDAKRPL
DIRYSFFMPRRVSAPPPPPPPHTSTTTPTTTTTTTTTSTRSSSRTISAPFLALALSTAPG
VSTAAASGPQWVTGPWMICSRTCDTGWQSRTVQCKDPQAKLAKGCPLGDRLSAFKQCLVK
KC
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgtgttttgcgcttttgctggagtcatgatggtgtttcgcattattttgctg
tgcatcatggagttgcatactggctgcgatgccgtgctcgccgccggtctcaccactttc
agggctttcgctccacctgcacaagagggtgttgtgcggaccgtcgatcggatttaccat
ggtggtgggaaggttggttacctactctacatggatgggagaaagtttcagttagatatg
gagagggatgagtcaattttgtcacatcacttcagtccgaaatatgtgatggccctgatg
ggggcgggagaagacgccgcgcctctgcaccgggagtgtgtttaccggggaaccgtggac
tccaaccccgagtccctggcggttttcagcctctgtggtgggggtctagagggatttttc
gctttgaaacacgcacgctacacaatcacacttctcatccgaaccaagggacacgataat
gacgtgcgctcgctggatgacaaggatgcgaagagcgcgctccactacttcacgcgggag
cgcttcagcttcgaagccatgcctgtgagcgagagctgtgggaccaaggaagggcgcggg
cgcatggatgcatcgaggaaacaccggcgtaagggtcgagggaacgggaaacgcgaccgg
tatggtgtcaccctggacaggggcgaggagcgcagcagagcgcacggcagaagatggtgg
acgcagttgtccaaacctgcctctccaccctcactgggaagtcggcgcaagaggtcggtt
tcgcgcgccaggcacgtggagctcctactggtcgcagatgagtccatgtccaagaagtat
ggcaaggacctgcaccactacctgctcacgctggcctccatcgcttccaagttgtacggc
catgccagcatcgagaaccccatccgtctgtccgttgtgaaggtgaccatggtcacggag
aaggagaaggggctggatgtgtccaagaacgcagccgccacgctcaagagcttctgcaag
tggcagaaccagcagaacccactggacgacgacaaccagcaccaccacgacgccgccatc
ctcttcaccaggcaggacctgtgtgggcaccactcgtgtgacacactgggcatggccgac
gttggcaccatctgttcaccagagaggagctgtgccgtcatagaggacgacggactccat
gccgccttcaccgtggcacacgagataggtcacttgctgggcctgtctcacgacgactcc
aagttctgcgaagagcgtttcggcgccagcgcggacaagcgtctcatgtcgtccatcctg
acctccatcgacgcctccaaaccctggagccgctgcacctcagctaccatcacggacttc
tttgacgatggcaacgccgagtgtctcctggactccccccgccagcccctgctcggctca
gaggagctgcccggccagagctacgacgctgtgcgccaatgccgcctggcgtttggaccc
gagtacacggtctgcccgggcatggacgtgtgcgcccgcctgtggtgcgcagtgatacgc
cagggccagatggtgtgcctgaccaagaagctgcccgcggtggagggcacgccgtgtggc
aagggtcgcatctgcctccagggaaagtgcgtggacaagacccgcaagagacactactcg
gcatctaaccatggtagttggagttcatggggtccgtggggggcatgttcgaggacgtgt
ggtggaggggtgcagtttgcccagcgtctgtgtaacaacccgccgccccgaaacaatggg
cgctactgcaccggcaagagggccatctacaagtcctgcagtgtcaccccgtgcccctcg
cccagtaagagtttccgccaggagcagtgtgagttgcggaacggcccccagacagaccct
aagggggtgaagacctttgtggagtgggtacccaagtttgcaggggtgctacctaaagat
gtgtgcaagctgacctgccgggccaagggcacaggctactatgtggtgttctcgcagagg
gtggcggacgggacagaatgtcggccgtacagcagctcagtgtgtgtgaagggcaagtgt
gtgcgtaccggctgtgacggcatcatcggctccaagctgcagtttgacaagtgtggcatc
tgtggaggggacagcaccggctgcatccgggtgatagggaacttcaccaagaagagtaag
ggctacacagacgtcgtgaagatcccagcgggctccacccacatcaaggtccgccagcac
aagcccaaggaccagccccgctacacagcctacctggccctgcgtcgtcccagtggcgac
taccttctcaacggcaagttcatgatctctacctcagagacggtcatccccctcaacggc
tcggtgctcaactacagtggctggagccagcgggacgagtggctacacagcatgggccct
ggggccctcagagaggcccttacagttcagattctggccacggacgccaagaggcccctg
gatatccgctacagcttcttcatgccccgtcgtgtttcggctccaccgccaccacctccc
ccgcacacctccacaactacacccaccactactactactacaacaaccacctctactaga
tcaagcagtagaaccatatcggccccgtttttggccctggctctctctacagccccaggg
gtgtcgacggcggcggcctctgggccccagtgggtgactggcccctggatgatctgctcc
agaacttgtgacacaggctggcagagccgcacggtgcagtgcaaggacccgcaggccaag
ctggccaagggctgccctctgggcgaccgcctctccgccttcaaacaatgcctggtgaaa
aagtgttga
DBGET
integrated database retrieval system
