Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413212
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Entry
139413212 CDS
T10872
Name
(RefSeq) matrilin-4-like isoform X1
KO
K19467
matrilin
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139413212
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
139413212
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Paralog
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
Matrilin_ccoil
EGF
EGF_3
EGF_LRP2
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
139413212
NCBI-ProteinID:
XP_071016429
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All DBs
Position
7:33469664..33535250
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AA seq
667 aa
AA seq
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MRQLCVCVSVLLVLATLAVARPKAADFQLNSNPALEQKCKSGPVDLVFIIDSSRSVRPHE
FETMRKFMIDIIHTLDVGSNATRVGLVQYSSQVQNEFSLKTHTKLQGMVKGINEIIPLAQ
GTMTGLAIKYVMNHAFTAAEGDRPKVPNVAVIVTDGRPQDRVAEVAAEARDKGIEIYTVG
VARADMTSLRAMASPPFEDHVFLVESFDLIHQFGLQFQDKLCGMDLCLESDHGCEHLCES
SPGSFHCLCRPGYTLNKDSKTCTAIDLCAEGKHDCEQSCIPSPGAFTCGCNIGYTLNNDK
KTCTMIDYCSFGNHSCQHECVDVLNGYFCRCAEGYTLQEDGKTCQMMDLCDEGKHDCEQI
CIASPGVFTCNCNAGYTLNNDKKTCTNLDLCNTVVHGCEHQCVSTPGSYYCICPEAQLLA
EDGKGCRTCRSANIDLVLLIDGSKSVRPQNFELVKQFVNQVVDSLDVSAHGTRVGLVQYS
SRVRTEFSLNMYQTAVDIKKAVMNVEYMEKGTMTGLALKHMVENSFSEAEGARKNVPRVG
LVFTDGRSQDDITEWAKKAKEAGITMYAVGVGKAVEDELREIASEPHDKHFFYTTDFTFI
NQIAENLKLNICAEESQGEIEVKNPCSCESLVEFQQATMTTLEQLTTKLAGMTARLEDLE
NQLLSRK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctgtgtgtctgtgtgtctgttctgctagtcttggccaccctggctgtggct
aggccaaaagcagctgattttcaactcaattccaatccagcactggagcagaagtgcaag
tctggcccagtggacctggtgttcattattgacagctctcgcagtgtgcgaccccacgag
tttgagaccatgcgcaaattcatgatcgacatcatccacacactggacgtgggatcgaac
gctacccgggtgggcctggtacagtactccagccaggttcagaacgaattctctctcaag
acccacacaaagctgcagggcatggtgaaaggcatcaatgagatcatccccttggcacag
ggcaccatgacgggcctggccatcaagtacgtcatgaaccatgccttcacggcagctgag
ggtgacagacccaaggtgcccaatgtagctgtcattgtaacggacggacggccccaggac
cgtgtggcggaagtggcggccgaggctcgggacaagggcatcgagatctacacagtaggt
gtggcccgggcggatatgacctcactgcgcgccatggcatcgccacccttcgaggatcat
gtcttcctggtggagtcctttgacctgatccaccagtttggcctgcagttccaggacaag
ctctgcgggatggatctatgcctggagtctgaccatggctgcgagcacctctgtgagagt
tcccctggctctttccactgcctgtgtcggccagggtacactctcaacaaggattccaag
acctgcacagccatagatctgtgtgctgaggggaagcatgactgtgagcagagctgtatc
ccctcccctggagccttcacctgcggctgcaacattggctacaccctcaacaacgacaag
aagacctgcacaatgatcgactactgttcgtttgggaatcacagctgtcagcatgaatgt
gtggatgtactcaatggctatttctgccgctgtgctgagggatacacgctccaagaggat
ggaaagacctgccagatgatggacctgtgtgatgagggtaagcatgactgtgagcagatc
tgtatcgcctcgccaggcgtcttcacctgcaactgcaacgctggctacactctcaacaat
gacaagaagacctgtacaaatcttgacctgtgtaacacagtggtgcatggctgtgagcac
cagtgtgtcagcacaccaggatcctactactgcatctgtcctgaggcacagctactggcg
gaggatggcaaaggctgcagaacctgcagatcagccaacattgacctggtcctcctcatc
gacggctccaagagtgtgcgtccccagaactttgagctggtaaagcagtttgtaaaccag
gtggtggactccctggacgtgtcggcgcacgggacacgagtgggcctagtgcagtactcc
agtcgcgtgcgaaccgagttctccctcaacatgtaccagacggcggttgacatcaagaag
gcggtgatgaatgtggagtacatggagaagggcaccatgacgggcctggctctcaagcat
atggtagagaacagcttctcagaggccgagggtgcccgcaagaatgtccctcgtgtgggc
ctggtcttcactgacggccgctctcaagacgacatcaccgagtgggccaagaaagccaaa
gaagcaggtatcactatgtatgctgttggcgttgggaaggccgtggaggatgagctgcgc
gagattgcctcggagccacacgacaagcacttcttttataccactgacttcactttcatc
aaccagatagcagagaacctcaagctcaacatctgtgcagaggagagccagggagagatt
gaggtaaaaaacccatgttcctgtgagagtctggttgagttccagcaagccacaatgacc
acgctggagcagctgacaacaaaactggcggggatgactgctcgattggaggacttggag
aaccagctgctgtcacggaaatga
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