Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413257
Help
Entry
139413257 CDS
T10872
Name
(RefSeq) sphingomyelin phosphodiesterase 2 isoform X1
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139413257
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
139413257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
139413257
NCBI-ProteinID:
XP_071016517
LinkDB
All DBs
Position
7:complement(38003776..38019590)
Genome browser
AA seq
442 aa
AA seq
DB search
MADSNTIRLRVFSLNCWGIRYLSKHCRERYAMIGELLSREEHDIVLLQEVWSEKDFLCLK
RKLSSTHPHSHYFKSGVIGSGMATFSRHRIHDAFLYRYSLNGYPYMAHHGDWFGGKAVGM
VILNIGRLAAHVYVTHLHAEYCREKDSYLPHRVVQAWELQQFIRHTSSGADLVILAGDLN
LHPQDLGNRLLRTYTGLRDSYTETAKFDGCEDGITLIAYNPFINPKELCPFEKGIRIDYI
LYKGSGRVSIQCESLSTTKGSVPDHPFPYSDHEALSADLQLQTLTQQAGGDETRGEQDCA
AGKLAELVDIVTEARTEVKVGLYCAERMRYTAARTGVMGMALLLLELAIAAVPWLALRAD
QPFPRASFYLLGVLCFAILITTFLLYIFYSMEVKALQGAEDQMRLAVGSLQERLRGFPLA
QPLNRLCRPLDGQDPCPLEPEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcaacaccatcaggctccgagtcttctccctcaactgctggggtatccgt
tacctcagcaagcactgtcgggagcgctacgccatgatcggagagcttttgagcagagag
gagcacgatattgtcctgctgcaagaggtctggagtgaaaaagacttcctctgcttgaaa
aggaaactttcctctacccatccgcactcccattacttcaaaagtggagtcataggcagt
ggaatggccacgttctccagacatagaatccatgatgcatttctctaccgctattcatta
aacggctacccatacatggcccaccatggagactggtttggaggcaaggctgtggggatg
gtcatattaaacataggcagactggcagcacatgtctacgtcacacatctgcatgcagag
tactgcagggagaaagactcctacttacctcatagagtggtacaggcctgggagctgcag
cagtttattcgtcatacctccagtggagcagacctggtgattttggccggagatctgaac
ctgcatccccaggaccttggcaaccggttgctacggacatacactggcctccgggacagt
tacacagagactgctaagtttgatggctgtgaggacggcatcactcttatagcatataac
cctttcatcaatcccaaagagctctgccccttcgagaagggcatcagaatagattacatc
ctctacaaggggtcaggaagagtgtccatccagtgtgagtctctgtcaaccaccaagggt
tctgtccctgaccatcccttcccttactctgaccacgaggcccttagcgcagacctgcag
ctgcagactctaacccaacaggcaggaggagacgagaccagaggtgagcaggactgtgct
gcaggtaagctggctgagctggtggacattgtgacggaggcccgtactgaggtgaaggtg
ggcctgtactgtgctgagaggatgcgctacacggcagctcgtaccggggtgatgggcatg
gccctgctgctgttggagctggccatcgctgctgttccctggctggccctgagagctgac
cagcccttcccccgggcctccttttacctattgggggtgctgtgctttgccatcctgatc
accaccttcctgctctacatcttctactccatggaggtgaaggctctacagggggcagag
gaccagatgaggctggctgtggggagcctccaggaaaggctgaggggattcccccttgcc
cagcctctgaaccgcctctgtaggccactggacggacaggacccctgccctctggagcca
gaggaatag
DBGET
integrated database retrieval system
