Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413261
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Entry
139413261 CDS
T10872
Name
(RefSeq) transcriptional enhancer factor TEF-5-like isoform X1
KO
K09448
transcriptional enhancer factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139413261
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
139413261
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
NNH1
Motif
Other DBs
NCBI-GeneID:
139413261
NCBI-ProteinID:
XP_071016533
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Position
7:complement(38023803..38062295)
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AA seq
426 aa
AA seq
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MDGDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHIQVLARKKVREYQAGIKAMNLDQASKDKALQNMAALSSAQIVSPSLIKSQLPP
LPHSPYPPQARFWPGPIPGQPGPSQELVLELNPGRIPGLGRNSYAIKPFAQSPYPNLPGP
APPPISTYEPLAPPLPPAATAVPVWQDRTIASSKLRMLEYSAFMEVQRDPDNYSKHLFVH
IGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKGPQNAFFLVKFWADLNSSGMQD
GPGSFYGVSSQYSSSENMTITVSTKVCSFGKQVVEKVETEYARMEGGKCVYRIHRSPMCE
YMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAFVFEVSTSEHGAQYHV
YRLVKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgccgagggggtgtggagcccagacatagagcagagcttccaggaggcc
ctggccatctaccccccctgtggacggaggaaaatcatcctctcagacgaaggcaagatg
tacggtcgcaatgagttgatagccaggtacatcaagctgaggacaggcaaaacccgcaca
agaaagcaggtatctagtcacatacaggtgttagcacggaagaaagttcgagaataccaa
gcgggtatcaaggccatgaatttggaccaggcgtctaaagacaaggccctccagaacatg
gcagcactgtcgtctgctcagattgtgtcaccgagcctgatcaagagccagctacccccg
ctgccccattcaccctaccccccgcaagccaggttttggccaggccctatcccaggacaa
cctggcccctctcaggagctggttctagagctcaacccgggaaggattcctgggcttggc
cgcaacagctatgctatcaaaccttttgcacagtccccatacccaaacctaccaggccct
gctcccccacctatatcaacctatgaacccttggcaccccccctccccccggctgctact
gcagtacccgtgtggcaggaccggaccatcgcctcctccaagctgcggatgctagagtat
tctgcctttatggaggtgcagagggacccggacaactacagcaaacacctgtttgtccac
attggtcagaccaacccttcctacagcgaccctctgctggaggcagtggacatcaggcag
atctacgacaagttcccagagaagaaaggcggactcaaagagctttatgagaaaggcccc
cagaatgcctttttcctagtcaaattttgggcggatcttaacagcagtggcatgcaggac
ggcccaggctccttctatggagtcagtagccagtacagcagctctgagaacatgaccatc
accgtctccaccaaagtctgctccttcggcaaacaggtggtcgagaaagtagagacggag
tacgcccgaatggaaggagggaagtgtgtctacagaatccaccgctctcccatgtgcgag
tacatgatcaactttatccacaagctcaaacacctgccagaaaaatacatgatgaatagt
gttctggaaaactttaccatccttcaggtggtgacaaaccgtgatactcaggagaccttg
ctgtgtatagcgtttgtgtttgaggtctcaacgagtgaacacggggcacagtaccacgtc
tacaggcttgtcaaagactga
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