Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413315
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Entry
139413315 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139413315
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139413315
04261 Adrenergic signaling in cardiomyocytes
139413315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139413315
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139413315
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
MCP-like_PDC_1
DASH_Spc19
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
139413315
NCBI-ProteinID:
XP_071016633
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Position
7:complement(40686808..40958154)
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AA seq
1112 aa
AA seq
DB search
MAICAQSYGIFCMFSIQTVLIISVSSPATGSLRFPQHYTMMHWAGRIEKELEKTLQLVTG
AQQMKGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTMYPW
QDGIKESDMEYYDSKAESDYTEDEDGEENLMENPYSVKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSSTGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKSSVMQMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQATMRNKKIFKESIMNMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRRDMIDGKSGHRKIKTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNELEL
SNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLTTYGFLA
VFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTLNDELLNPEN
DTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQTCG
PTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMHALYNNSFY
NRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQLLCGMAYH
SWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLNNTNLL
FVVAEKMPCNTCELEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDYNLAENTSDCGS
GHSFRPSFQTLLTIQLVLLYPIASTHILPLLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtattttctgtatgttctcaatccaaactgtcctc
atcattagcgtctcttcgccggcaacggggagcctccgcttcccccagcactacacaatg
atgcattgggcaggccgtattgagaaggagctggagaagactctgcaactggtcactgga
gcccagcagatgaaaggaatttacaatgagaagaagagccagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctagccagagaggcggagcagctgcagacaatgtatccctgg
caggacgggatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatgaagacggggaagagaacctgatggagaacccctactccgtgaagctggag
tttgtggacgatcccaactttaaaaacaaagtgaactactcctacagcgccgtccagatc
cctacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggtgtttattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagctcgacgggggtcacaagatactacccagccactccttggagagcacccaataag
attgacctgtatgacgtgcgcaggcgaccatggtacatccaaggggcatcctctcccaag
gacatgatcatcattgtggatgtgagtggcagtgtcagtggactcaccctgaagctgatg
aagtcctctgtgatgcagatgctagacactctgtcagatgatgactatgtgaatgtagcc
aggtttaacgagaaggcagatgccgtggtcccctgctttaagaccttggtccaggccacc
atgagaaacaagaagatcttcaaggagtccatcatgaacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcccag
gacatctttgagaagtacaactggcccaacaaaaccatccgagtatttaccttttcagtc
gggcagcacaactatgatgtcacacctttgcagtggatagcttgtgccaacaaaggattc
tactacgagattccatccattggcgccatcagaatcaacacgcaggagtacctagatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagctggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcatcaccgggaccatgccggtcttcaacctc
accgctgacgcaaactctcagactcagctcgtccttggtgtcatgggagtggatgttgcg
atcaacgaaattaagaggaagacgccaacgtataggcttggagccaatggatacacgtat
gcaatcgacaaaaatggctatttgctcctgcaccccaacttacaacctaagatcattaac
ttcagagagcctgtcactctggacttcctggatgctgagctggaggacagtaaaaaggag
gagatccgtcgtgacatgattgatggaaaatcagggcataggaaaatcaaaaccctcatt
aagtcagttgatgagaggtacattgatgaggctatgcggacatacacctggacaccggtg
gaaggcacagattacagtctcgggctggttctgcccacgtacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaatgagctggagctc
tccaacaacaacactgacttcctgctcaacttcatcgctctcatggagaaggtgactccc
gactccaaacaatgtgacaacctgctccttcataacctcatcctggacacgggcatcatc
agacagctggtggagaaggtgtggaagaccaaagacctcaccacatatggctttttggca
gtgtttgctgcaacagatggagggattacaagagtttttcccaacaaggctgctgagacc
tgggaggaggaccctgagccttttaacgccagctattaccgccgtagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccttgaatgatgagctgctgaatccagagaac
gacaccatagggatcctggtcagcactgcagtggagatcacagtgggagggaagacaatc
aaacctgcagtggttggagtaaagctggatcttgaggcctgggtggacaaattcaagatc
ctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccgaccagtggctgtgagatggactgtgacgccaacagcgaagacctgctgtgttacctg
gtggatgacggtggtttcctgatcatgtccaatcagaaggactactggaacaagattggc
atgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactctttttac
aaccggaagcagtcctttgactaccagtctgtgtgtgaccccgtgccgagcagcaacacc
ggggctgcgccaagaggcgtgtttgtgcccaccattgccgactttgtgaacctggcctgg
tggacatcagcagctgcctggtccctattccagcagctgctctgtggaatggcttaccac
agctggtttgtcacagatgaggtggaggcagaggggatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcaccaacatcaacagttcctatgacatcctgcag
gactgtggcaactgctccaggctgatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtagcagagaagatgccctgcaacacctgcgagttggagaaactgtcccaggcg
gagacagagttcaaggacgataacccatcatgtgaggatatgagtgcagcgaggtatcga
aaagggccaactgtgtgctacgactacaatctcgctgagaacacatctgactgcgggagc
ggccactcattccgcccctccttccagaccctgctcacgattcagctcgtcctgctctat
ccaatcgccagcacccatattctgcccctcctactttaa
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