Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413323
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Entry
139413323 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139413323
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139413323
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139413323
04090 CD molecules [BR:
ocla04090
]
139413323
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139413323
CD molecules [BR:
ocla04090
]
Proteins
139413323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
ETX_MTX2
RANK_CRD_2
Motif
Other DBs
NCBI-GeneID:
139413323
NCBI-ProteinID:
XP_071016645
LinkDB
All DBs
Position
7:complement(41757893..41766372)
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AA seq
471 aa
AA seq
DB search
MILRTVSGVLTVRIFLAIMVQPVENMVYTLPYTPDSDGSCRNKTAEYYNPDVNLCCSKCT
SGTRRKVVCSSTSDTACEPCPSDQYSGTFNYFPKCFRCPKCSADKGLKYVQKCSSTTKTQ
CACQTGMYCILDQHPDCKECSSYTYCKPGHGVSVDGTTAGQEAGTAESDVECASCPNGTF
SDQHSYTQICQHHTDCVSQGRDVQTYGTATTDAVCGPKVNGRLVSILQTTTPPSPPTTIP
PSVKGHTTSSLQSMDMSTVPTTLGSKLTSSPSDPLVIAPMEEKSPGVDLWIVAGAIGGVM
FLLLIIGTIIYKKAFTKFIRVSSTEDVNGKEAIKCLLGKGDCSNVGQAETQQDAIKTWSG
SGCSNSLEGLSICPVQSTLPQPSILASTPQPSPQSTSPLASVPLVNVNITVTYPVNIGNE
LCSRPTSTQIDSPQADPETPLSREEEVYVNMPQRESCKEALTAVQEFGNDV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatactgaggactgtaagtggcgttctgacagtaaggatttttctagcaatcatggtg
cagcctgttgagaacatggtgtacactctgccatacacaccagactcggacggatcctgc
cgcaacaaaacagctgaatactataacccagatgtaaacctgtgctgcagcaagtgtact
tctgggacacgccggaaagttgtatgcagctctacctcagacacggcgtgtgaaccatgt
cctagtgaccagtacagcgggacctttaattacttcccaaaatgcttcagatgtcccaag
tgttcagcagacaaaggcctgaagtatgtccagaagtgctccagcaccaccaagacccag
tgtgcgtgccagactgggatgtactgcatactggaccaacacccggactgtaaggagtgt
tccagttatacatactgcaagcctggtcatggggtctctgtagacggtaccacagctgga
caggaggctgggacagcagagtcggatgtggaatgtgcatcatgccccaatggaaccttc
tctgaccagcactcctacacccagatctgtcagcaccacacagactgtgtgtctcagggg
agggacgtacagacttacggtacagccaccaccgatgcggtgtgtggaccgaaggtaaat
ggacgactggtctccatcctccaaaccaccacacctccaagcccaccaaccacaatacca
ccctctgttaaagggcataccacatcaagtctacagagcatggatatgtctacagtacca
accaccctgggctcaaagctgacatctagtccctctgatccactggtcatcgctccaatg
gaagaaaaatcaccaggcgtcgacctttggatagttgcaggtgctatcggaggtgttatg
ttcctgctgctgatcataggcactatcatttacaagaaagccttcactaagttcatacgt
gtatcttctacagaagatgtaaatggaaaggaggccattaaatgtctgctggggaaagga
gactgcagtaatgtcggtcaggcagagacccagcaggatgctattaagacctggtcaggc
tctgggtgctccaacagcctggagggcctgtcaatatgccccgtccagtccacccttcca
cagcccagcatcctggccagcaccccccagcccagcccccaatccaccagccctctggca
tctgtccccctagttaatgtcaacatcactgttacctaccctgtgaacataggaaatgag
ttatgctccagacctaccagcacccagatagactcaccacaagccgaccccgagacccct
ttatcaagggaggaggaggtgtatgtgaacatgccgcagcgagagagttgcaaagaggca
cttacggcagtacaggagtttggaaatgatgtatga
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