Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413351
Help
Entry
139413351 CDS
T10872
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139413351
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139413351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
V-set
fn3
LRR_Zer-1
Pur_ac_phosph_N
LRRNT
Ig_6
Ig_C17orf99
LRR_NXF1-5
Sp38
Motif
Other DBs
NCBI-GeneID:
139413351
NCBI-ProteinID:
XP_071016710
LinkDB
All DBs
Position
7:44198273..44210777
Genome browser
AA seq
720 aa
AA seq
DB search
MARGRFIYRLLGQLLAGLILASVGLSSIQRDNECPQLCVCEIRPWFTPQSTYREATTVDC
NDLRLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLFNLTELDLSQNNFSSIHDVGLTNM
SQLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINIISPNALSGLHNLLRLHLNSNR
LKAIDSRWFESTPNLEILMIGENPVVGILGFNFKPLVNLRSLVLAGMDLTDVPGNAFVGL
DNLESLSFYDNKLIRVPQNALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMG
ELVSVDRFAVDNLPELTKLEATNNPKFSYVNRQAFRDVPALESLMLNNNALNALYQSTVD
SLPNLREISIHSNPLRCDCVIQWMSSNKTSIRFMEPLSMFCALPVEVRGQHVRELLQQDS
AEQCLPMISHDSFPNHLNLDIGMTVDLDCRAMSQPEPDIYWVTPVGNKVMVETLSDKYSL
SSEGTLHISQIQVEDSGRYTCVAQNAEGADTRVTAIRVNGTLLDSTQLMKVYVKKTESHS
ILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPSTEYEVCLTV
SNIHQQTQKSCVNVTTKHAAFTVEISDQGTNTALAAVMGTIFGIISLASMAVYISKRWKR
KNYNHSLKKYMQKTSSIPLNELYPPLINLWEADSEKEKDVSSSSETKPGQVDTTRSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagggagattcatctaccgtctactagggcagttgttggctggcctgattctg
gcgtccgttggtctatcctccatccagagagataatgagtgtccccagctgtgtgtgtgt
gagatccgaccctggttcaccccccaatccacctacagagaagccacgacggtggactgt
aacgacctccgtctcacacgcattccaggcaacttgtccagcgacactcaggtgctcctc
ctgcagagcaattacatcgccagaaccagtgaagagctggagcagctcttcaacctgacc
gagctggacctgtctcagaacaacttcagcagcatccacgatgtgggcctcaccaacatg
tcccagctcaccacactgcaccttgaggagaaccagattactgaaatgcctgactactgc
ctacaggacctcagcaacctgcaagagctctacatcaaccataaccagatcaacataatc
tccccaaacgccctctctggtctgcacaatctgctcaggctccatctcaactccaacagg
ctcaaggccattgacagtcgctggtttgagtcaacgcccaaccttgagatcctcatgatc
ggggaaaatcctgttgttggcatcctgggctttaacttcaagccgcttgtaaacctgagg
agcttggttctggctggaatggatttaacagacgtccctggaaatgcctttgtgggacta
gacaacctagagagtctctccttctacgacaataagctaattagagttccccagaatgcc
cttcagaaactacctaacctcaagttcttggacttgaacaaaaaccctgtgcacaaaatc
caagagggggactttaagaacatgctgaggctgaaagagctgggcataaacaacatgggg
gagctggtctccgttgaccgctttgccgtcgataacctccctgagcttaccaagctggag
gctactaataaccccaaattttcctacgtgaaccggcaggctttccgtgacgtccctgcc
ctggagagcctcatgttgaacaacaatgcccttaacgccctctaccagtccactgtggac
tccctgcccaacttgcgtgagatcagcatccacagcaaccccctgcgatgtgactgcgtc
atccagtggatgagctccaacaagaccagcatccgcttcatggaacccctctccatgttc
tgtgctcttccagtcgaggtcagaggtcagcatgtgagggagttgctccagcaggactca
gcagagcagtgcctgcccatgatctcccacgacagctttcccaaccacctgaacctggac
ataggcatgactgtggacctggactgccgtgccatgtcccagcctgagccagatatctac
tgggtcacacctgtagggaacaaggtgatggtggaaaccctgtctgataaatacagcctc
agtagcgagggaacactgcatatctctcaaatccaggtcgaggactctggcaggtatacc
tgtgtggctcagaatgctgagggggcggacactcgggtgactgctattagggtgaatggt
actctcttagacagcacccagttgatgaaagtgtacgtgaagaagactgagtcccactcc
attctggtttcctggaaggtcaactccaacgtcatgacctccaacctcaagtggtcatct
gccacaatgaagatagacaaccctcacatcacctacacagccagggtcccagtggatgtc
catgagtataacctcacacacctacagccctccaccgagtatgaggtatgtctcaccgtc
tccaacatccaccagcagacacagaagtcctgtgtcaatgtcacaacgaagcacgctgcc
ttcactgtggagatatctgaccaaggcactaacaccgctctcgcagcggtcatgggtacc
atattcggcatcatcagcctggcctctatggctgtgtacatttccaagaggtggaagagg
aaaaactacaatcactccctgaaaaagtacatgcagaaaacatcttccatccccctcaat
gaactctaccctcccctcatcaacctgtgggaggcggacagtgagaaggagaaagatgtt
tcctcctcatcagagaccaaaccaggccaggtggacacaacacggagctactacatgtgg
tga
DBGET
integrated database retrieval system
