Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413353
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Entry
139413353 CDS
T10872
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139413353
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139413353
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
DUF5365
Oscp1
Motif
Other DBs
NCBI-GeneID:
139413353
NCBI-ProteinID:
XP_071016713
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Position
7:44422170..44426201
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AA seq
409 aa
AA seq
DB search
MERITSAQPPPCMAKHQLLEMADMQGMDFPMYVYKPRRGLKRGEDSKESYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLATLGHLEKAVVLELTLKHVKALSTLLDQQQQKIIALQN
GMQISDQSSVSSENSEEMFRLGFHVCAKEVLQYLANQESSKDHLIPSHMISHLQKVASEV
IQGPPRPQPEESTHKPAESMEKPAGHPPKGNEGNAKNFVSVIQRTYPHGHGEQSGSDTDT
DSGYGGEHEKRDPKGQRTSCYGKEGELKYDVAERMAGGGIKQEGDEPQIKRLRADSSEDE
SSSGQVVSSHGSYMSFSQHQTPLCMPFYLIPQMAAAWPMLEKCWYQGGMPLLYPGMSGSA
ASLSPEKLPQNLVMSPRPGSPAHHQTPMDSPALFQALKQVPPMNLESKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcacaacctcctccttgtatggcaaaacaccagttgctggag
atggcagacatgcaaggaatggatttcccaatgtacgtgtacaaaccccgacggggtttg
aagcgcggggaagacagtaaggagtcatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgcctgaacatctc
aaacttgcaactctgggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggatcagcagcagcagaaaatcattgcattacagaat
ggcatgcaaatcagtgatcagagcagtgttagctcagagaacagtgaggagatgttccgc
cttggtttccacgtctgtgctaaggaggtcctccagtacctggctaaccaggagagcagc
aaagaccacctgatcccctcccacatgatcagccatctccagaaagtagcatcagaggtg
atccagggtccacccaggccccagccagaagagtctacccacaaacccgcagagagcatg
gaaaagcctgctggtcatccgcctaagggcaacgagggtaacgccaagaactttgtgtct
gtcattcaaaggacatacccccacggacatggggagcagagtggcagtgacacagacact
gacagtggctatggaggggaacacgagaaacgggaccccaaaggccaacgcacaagctgc
tacggcaaggagggggagctcaagtatgatgtggctgagcggatggcaggaggtggcatc
aagcaggagggtgatgagccccagatcaagaggttaagagctgactcctcagaggatgag
tcttcctctggacaggtggtcagcagccacggaagctacatgagcttctcccaacaccag
accccactctgcatgcccttctacctcatcccccaaatggctgcagcatggcccatgctg
gagaagtgctggtaccaagggggcatgccccttttgtacccaggcatgagtggctctgca
gccagcttgtctccagagaaactaccccaaaacctggtaatgtcgcccaggccaggttcc
ccggcacaccaccagacacctatggattcaccagctctcttccaagctttaaagcaagtc
ccccccatgaacttggaatccaaagactga
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