Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413355
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Entry
139413355 CDS
T10872
Name
(RefSeq) semaphorin-3F-like isoform X1
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
Ig_2
ig
I-set
PSI
Ig_6
V-set
Motif
Other DBs
NCBI-GeneID:
139413355
NCBI-ProteinID:
XP_071016714
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Position
7:44558606..44655660
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AA seq
798 aa
AA seq
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MLLDSLWTVHMLLALVVGALCNHNIIDPHAAPRVFISFKELRSTGTAQHFAYLLNTSDYR
ILRMDEDHDRMYVGSKDYILSLDLHDINKEPLILHWPVSQQRKTECVLSGKDTNGECGNF
IRLIEPWNRTHLYVCGTGAYNPICTYVNRGRKPQAAMHLQMPQTGGRASRAAQPNDVSET
LGLKEYIWHLEPGKVESGKGKCSYDPKLNSVSALINGELYAGVYIDFMGTDSAIFRTGKQ
TAMRTDQYNSRWLNDPSFVHVQLIPDSAERNDDKLYFFFRETSAEMGQSPVTQARIGRIC
LNDDGGHCCLVNKWSTFLKARLICSVPGADGIETHFDELRDVYIQPTQDTKNPVIYGVFS
VSGSVFRGSAVCVYSMADIRQVFNGPFAHKEGPNYQWVAYTGKIPYPRPGTCPGGTFTPN
MKSTKDYPDEVINFMRNHPNMYNAVYPMHKRPLVVRTNVDYEFTTITVDQVAAADGNYEV
LFLGTDRGTVQKVIVLPKDDLQTEELVLEEVEVFKVPTPITTMKISSKRQQLYVSSELGV
THLALHRCDVYGEACADCCLARDPYCAWDGKSCSRYSTSQKRSDPFRRSRRQDVKYGNPI
RQCRGFNSNANKNTLEMVQYGVEGSSTFLECQARSPHAAIKWHLQRDNSDRRKEMRSDGR
VLKTEQGLLLRSLQPSDSGVYQCTATEKNFKHTLVKLQLVVLSSRAINNVLVEGGGLGPS
ALQSSAWTPSAGQYKDLLTILSQPEMGLINQYCQDYWQLGDPMMGAIKANDMKELKEQKK
PRNRRHHGEGEDEEEVET
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctgttggacagtctgtggacggtccacatgctcctggccctggttgtcggggctctg
tgcaatcacaacatcatcgaccctcatgctgcaccccgcgtcttcatctccttcaaagag
ctgaggtccaccggcactgcccaacactttgcctacctgctcaacacgtctgactaccgt
atcctgcgtatggacgaggaccacgaccgcatgtacgttggcagtaaggactacatcctg
tccctggacctgcatgacatcaacaaggagccgctcattctccactggcctgtctctcag
cagaggaagactgagtgtgttctaagtgggaaggacaccaatggcgagtgtgggaacttc
atccgtctgattgagccatggaacaggacccacttgtatgtctgtggtactggggcctac
aaccccatctgcacctacgtcaaccgtggacgcaaaccgcaggccgccatgcacctgcag
atgccccagaccggagggagggctagccgcgcggcccaaccaaacgatgtgtccgaaaca
ctgggactaaaggaatacatatggcatttggagccgggcaaagtggagtctgggaaagga
aagtgctcctacgacccaaagctcaacagcgtctcagctttgatcaacggtgaactctat
gctggggtctacattgacttcatgggaacagactctgccatcttccgtactgggaaacag
accgccatgcgtacagaccagtataactccagatggttaaatgacccgtcctttgtccat
gtgcagctcatccctgacagcgcagagaggaatgacgacaagctttacttcttcttccgt
gagacgtctgctgagatgggccagagtcccgtgactcaggcccgcatcggtcggatctgc
ctgaatgatgatggtggacactgctgcctggtcaacaagtggagcactttcctgaaggca
cggctcatctgctcagtgccgggggccgacgggattgagacgcacttcgacgagctccga
gacgtttacatacagccgacccaggacaccaagaatcctgttatctacggagtcttttcc
gtctcgggctcagtgtttaggggctcagcagtgtgtgtctactccatggcagacatccgc
caggtcttcaatgggcccttcgcccacaaagaagggcccaactaccagtgggtcgcctac
actgggaagatcccctaccctcgacctgggacgtgcccaggtggaacgttcacccccaac
atgaagtccaccaaagactacccagacgaagtcatcaacttcatgaggaaccaccccaac
atgtacaatgcagtgtacccaatgcacaagcgccccctggtggtccggaccaacgtggac
tacgagttcaccaccatcactgtggaccaggtggccgccgcagacgggaactatgaagtg
ctgttcctgggaactgacagggggacggttcagaaggtgattgttctgcccaaagacgac
ctgcagactgaagaactggtcctggaggaggttgaggtgttcaaggttccaactccaatt
acaaccatgaagatttcgtccaaaaggcaacagctctacgtgtcttctgagcttggtgtg
acccacctggccctccaccgctgtgatgtgtatggggaggcgtgtgctgactgctgcctg
gcccgggacccctactgcgcctgggacggaaagtcctgctctcgctactccacctcgcag
aagaggtctgacccctttagacgcagccggaggcaggacgtgaagtacgggaaccccatc
cggcagtgcagaggcttcaactccaatgctaataagaacaccttggagatggtgcagtat
ggagtggagggcagcagtaccttcctggagtgccaggcccgttctccccacgccgccatc
aagtggcacctgcagagggacaacagtgaccgccggaaagagatgcgctctgacgggcgg
gtactgaagacagagcaaggtctcctgctgcgttctctccagccctcagactccggggtc
taccagtgcacggccacagagaagaacttcaaacacacgctggtcaagctgcagctggtg
gtcctgtccagccgagccatcaacaacgtcctggtggagggtgggggactggggccatct
gctctccagtccagcgcttggacgcccagcgcgggtcagtacaaggacctgctgaccatc
ctgagccagccagagatgggcctgatcaaccagtactgtcaggactactggcagctggga
gaccccatgatgggagccatcaaggccaatgacatgaaagagctcaaggagcagaagaaa
ccacgcaaccgccgacatcacggtgagggagaggacgaagaggaggtggagacatga
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