KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413363
Entry
139413363         CDS       T10872                                 
Name
(RefSeq) host cell factor 1-like isoform X1
  KO
K14966  host cell factor 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083  Polycomb repressive complex
ocla04980  Cobalamin transport and metabolism
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    139413363
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    139413363
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139413363
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ocla01009]
    139413363
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139413363
   03029 Mitochondrial biogenesis [BR:ocla03029]
    139413363
Protein phosphatases and associated proteins [BR:ocla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     139413363
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     139413363
   HMT complexes
    COMPASS/SET1 complex
     139413363
    MLL-HCF complex
     139413363
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     139413363
Mitochondrial biogenesis [BR:ocla03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    139413363
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 fn3
Other DBs
NCBI-GeneID: 139413363
NCBI-ProteinID: XP_071016744
LinkDB
Position
7:45124973..45138560
AA seq 1714 aa
MTGSALQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQW
FIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLKAKTHK
NGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWDI
PITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWTKPSVNG
TAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMAWESV
VMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPHAPSR
VQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAATAVTSPALNAATSLQGNLPKGPAT
ASPSAQNLPHTGITIVPQASSPTILPNIPRSPLAASTAHGPAILKVAAPPSGTGTSLVTV
RPNQAGKSPVTVTSLLPGVRMVVPAQTAQGTPVGSSPQMSGMAALAAAAAATQKIPPSSS
TVLNIPAGATLVKTMAGSTTVKMASPLMVSNPATRMLKTAAAQVGTATVSSSNSPNRPII
TVHKSGTVTVAQQHQVVTTMVGGVTKTITLVKSPLTMGGSGTLQISNLGKMMSVVQTKPV
QTSAVTGQASTNPLTQLIQTKGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILN
ISGMSPTTTKQGTTIIKTIPMSAIMTQPGATVTSSTGKTPYTIISTKMMTTGTPGKIITT
MPKLGTATGQQGLTQVVLKGAPGQPGTILHTVPMGGVRLVTPVTMSSVKPNITTLVVKGT
TGVTTLGTVTGTVSSSLAGSIVASANASLATPITTLGTIATLSSQVINPTAITVSAAQTS
LTTATTLSASTMSANQPTQVTLITTPSGVEAQPVQDLPVSFLASPTSEQPSSTEVGDVPG
TVTMVCSNPPCETHETGTTNTATTASSDIGGVQRVCSNPPCETHETGTTNTTTTASTNMG
GAMRVCTSPPSETHEMGTTNTSTITHSIMGSNQMGTVQSSSSSHPPSLSSPPQTTTSSSP
GTATGNQGPENLSTGTTFTPTTACSNMGSAQTGTVQSPKPAVGSTMCLNPPCETHETGTT
NTATQSLSSMGNGQTGTVQRVCSNPPCETHETGTTSTPSQASSNMAGNQTGTAQRVCSNP
PCETHETGTTNTATTATADGADSATSSTETPSTTASETTPATIQSRAITTVTQSTPAPGP
SVPSILSITEGAAGSTEEPMQTDAATEGGETAMETGLSPELSEGQMGTGLSAEELAVTAA
AEAAAQAAATEEAQALAIQAVLQAAQQAVMNKGDSGSTGQQAITIPIVLTQQELAALVQQ
QHQLQEAQAQAQAQAQAQAQAQQQGNVQALPTEGLAPADSLNDPASESNGHPSVASLLPR
TSTETLAPSSTFSVASPAKLQAAVAEVANGIEGGKLNPQPAPIKTLVKKENQWFDVGIVK
VTNMVVTHFFIPEDDSQVEDDSGAIPDYNQMKKMELQPGTAYKFRVAGINACGRGFFSEI
SAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSTQTAEPKAS
TPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQ
ESSKDGASAKLAPKRPVSSPDAKAAGQKKARTDP
NT seq 5145 nt   +upstreamnt  +downstreamnt
atgactggttcagctctacagccacgatggaagcgggtgctgggatggtctggccctgtc
cctcggcccagacatggtcacagagccgttgctataaaggaattgatggttgtttttgga
ggaggaaatgaaggaattgtggatgagttgcatgtctacaacacagcaacaaaccaatgg
tttatccctgcggttcgtggtgatattccccctggatgtgctgcatatggttttgtttgt
gatggcacccggcttctggtgtttggtggaatggtggaatatggaaaatacagcaatgat
ctctatgagctacaggccagcagatgggaatggaaaaagttgaaagctaagactcacaaa
aatggcccgcctccctgtcctcgacttggccacagtttctcgctggtgggtaacaagtgc
tacttgtttggaggactggctaatgacagcgaggaccccaaaaacaacatccccagatac
ctgaatgatctgtacaccctggagcttcgtgctggctccagtgttgtgggctgggatata
ccaattacttatggtgttttgccacctcctcgcgagagccacactgccgtagtgtacaca
gaaaaggacagcaagaaatctcgcctgatcatctatggagggatgagtggctgtcgtctg
ggagatctatggacacttgacatcgacaccctgacctggactaagccatcagtgaatggc
acagcacctctgcccaggagtcttcactctgccaccaccatcacaaacaagatgtttgtg
tttgggggatgggttcccctggttatggatgatgtgaaggtggccacacatgagaaggaa
tggaagtgcacaaacacactggcctgcctaaatcttgactccatggcctgggaatcagtg
gtgatggatactctggaggacaatatcccaagggcccgggcaggacattgctctgtggcc
atcaactctaggttgtatgtctggagtggccgtgacggttaccgtaaagcatggaacaac
caagtctgctgtaaagacctctggtaccttgaaacagagaggccacacgctccctcgaga
gtgcagctagtccgtgccaacaccaactccctggaggtaagctggggcgctgtgtccact
gcagacacctatctgctgcagctacaaaagtacgacattcctgccgccactgctgtgacc
tcgccggccctcaatgccgccacctctctgcaagggaacttgcctaagggcccagccaca
gcttctccctctgctcagaacctaccacacacaggtatcactattgtgccccaggcttct
tcccctacaatccttcccaacattcccagaagcccgctggctgcctccacagctcatggg
ccagctatcttgaaggttgcagcgcctccgtctggcacgggtacctcccttgtcactgtg
cgacccaaccaggctgggaaatcccctgtcactgtgacatcacttcttccaggagttcgc
atggttgttcctgcccagaccgcccaaggaacaccagtcggcagtagccctcagatgagt
ggcatggcagctttggctgcagctgcagcagccacacagaagatcccaccctcttcaagc
actgtactcaacattccagcaggtgccacccttgtcaaaaccatggctggctccaccaca
gtcaaaatggcatctcctctcatggttagtaacccagccactcgcatgctgaagacagct
gcagctcaggtgggcacagcgaccgtatcgtcatccaactcgcccaacagacctatcatc
actgtgcacaagtcgggcacggttaccgtagcacagcaacaccaggtggttaccaccatg
gtgggaggagtcaccaagaccatcaccctggtcaagagccccctcacaatgggaggcagc
ggcactttgcagatctccaaccttggcaagatgatgtctgtggtacaaaccaagccagtg
cagacatcggctgttacaggccaggcttccactaaccctctcacacagctcatacagacc
aagggttctctccctgccggcaccatactgaagctggtgacctcagcggacggcaagccc
accaccatcatcaccacatcccaggcgggaggaaccgggaacaaacccaccatcctgaac
atcagcggcatgtcgcccaccacaaccaaacagggtaccaccatcatcaagaccatccct
atgtctgctattatgacccagcctggagccacagtgaccagcagcacagggaagacgccc
tataccatcatcagcaccaagatgatgaccactggcactccaggcaaaatcatcactacc
atgcccaagcttggtactgcaactggccagcaagggctgacacaggtggttttgaaggga
gccccgggccaacctggcaccattctgcacactgtacccatgggtggagtcagactcgtc
accccggtcacgatgtcttctgtcaagcccaatataactacactggtcgtcaagggaaca
actggtgtcaccaccctggggactgtcacagggacagtctcctccagtctggcagggagc
attgtagccagtgccaatgcctctctggcaactccaatcaccacccttggcaccatcgcc
accctgtccagccaagttatcaaccccactgccatcactgtgtcagcagcccagaccagt
ctgaccacagctactaccctttccgcttccaccatgtcagcaaaccagcctacccaggtg
actctcatcaccacccccagcggggttgaggcccagccagtgcaggacctgcctgtgtcc
ttcctggcctcccccacctctgagcagccctcttccactgaggtcggggatgtccctggc
actgtcaccatggtctgctccaaccccccctgtgagacccacgaaacaggaaccaccaac
accgcaaccacagcctcctccgatataggtggggtgcagagggtctgctccaaccccccc
tgtgagacccacgagacgggcaccaccaacaccacaacgaccgcctccaccaacatgggc
ggggcaatgagggtgtgtacaagccctccatcagagacccacgagatgggcaccactaac
acctcaaccatcacccactccatcatggggtctaaccaaatgggcactgtccagagtagc
tcatcttctcaccccccatctctgtcctctccccctcagacgaccacctcttcttccccc
ggaaccgccacaggcaaccagggaccagagaacctgagcaccggcaccacattcaccccc
accacggcatgctccaacatgggctcagcccagaccggaactgtgcagagtcccaagcca
gccgtgggctctacgatgtgcttaaacccaccctgcgagacacatgaaacaggcacaacc
aacactgccactcagtccttgtccagcatgggtaatgggcagactggcactgtgcagagg
gtgtgctcaaacccaccctgcgagactcacgaaactgggaccaccagcaccccgtcccag
gccagctcaaacatggccgggaaccagacagggacggcgcagagggtgtgttccaacccc
ccctgtgaaacccacgagactggcaccaccaacacggcaactactgccacagcagatgga
gcagacagtgccaccagcagtacagagacaccttccaccactgcatcagaaacaacccca
gccaccatccagagcagagccatcactactgtgactcagtccacaccagccccggggccc
tcagtaccttccattttgtcgatcactgagggtgctgcgggttccacagaagagcccatg
cagacagacgcggccacggaggggggagagacagctatggagactgggctgtccccagag
ctgtcagagggacagatggggacaggtctgtctgcagaggagctggctgtgaccgcagcg
gcggaggcagcggcgcaggctgcagccacagaggaggcccaggccctggccattcaggca
gtcctccaggcagcacagcaggcagtcatgaacaagggtgattctggctcgaccggacag
caggccatcacaatccccatcgtcctgacccagcaggagttggcagccttggtccagcag
cagcaccagctccaggaggctcaggcccaggcccaggctcaggcccaggcccaggctcag
gcccagcagcaaggaaatgtccaggccctacccactgagggccttgcccccgcagacagc
ctcaacgaccctgcgtctgagagcaacggacaccccagtgtggcatcactgctcccgcgc
acatccactgagaccctggccccctcaagcacattttctgttgccagtccagccaagctg
caagctgctgtagcagaggtggccaatggcattgagggtgggaagctaaaccctcaacca
gcccctatcaagactcttgtaaaaaaagagaaccagtggtttgacgttggcatcgtcaag
gtgacaaacatggtggttacgcacttcttcatcccagaagacgattctcaagtggaggat
gactcgggtgccatcccagactataaccagatgaagaaaatggagctgcagcctggcaca
gcctacaagtttcgtgtcgctggtatcaacgcttgtggtcgtggtttcttctcagagata
tctgcttttaagacctgtttaccaggcttccctggagcaccttgtgccatcaaaattagc
aagagcccagatggtgcccacctcacctgggagcctccctctgtgacatcagggaagatc
attgagtactctgtgtacctggccatccagagcacccagacagctgagcccaaggcctcc
accccagcccagctggccttcatgcgggtgtactgtgggcccaacccctcctgcttggtg
cagtcctccagcctctccaatgcccacatagactacaccaccaagcccgccatcatcttc
cgcatagctgcgcgcaacgagaagggctacggccctgccacacaagtccgatggctgcaa
gagtccagcaaagatggagcctcggcaaaacttgccccaaaaagacccgtttcctcgcct
gatgctaaggctgctggtcaaaagaaagcaagaacggacccgtga

DBGET integrated database retrieval system