Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413405
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Entry
139413405 CDS
T10872
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00020
Citrate cycle (TCA cycle)
ocla00640
Propanoate metabolism
ocla01100
Metabolic pathways
ocla01200
Carbon metabolism
Module
ocla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ocla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
139413405
00640 Propanoate metabolism
139413405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139413405
Enzymes [BR:
ocla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
139413405
6.2.1.5 succinate---CoA ligase (ADP-forming)
139413405
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139413405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
139413405
NCBI-ProteinID:
XP_071016842
LinkDB
All DBs
Position
7:47672812..47803884
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AA seq
443 aa
AA seq
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MVLHSDLFRVNMAASIVSQTVARGLRGASAKHLFLDKFKCARVSSRRWLNLQEYQSKKLM
QESGVTVQRFYVADNAPDALQAAKRLGAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKD
PSAVGELANRMLGYSLTTKQTPKEGVKVKTVMVAEALDITRETYFAILMDRACNGPVMVG
SPQGGMDIEEVADKTPELIFKEVIDIFEGVRDDQALRMAANLGFKGPLERQAADQIKRLY
ALFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFALDDMSESDPTETEA
AKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKEKQVYEAFKLL
TADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAKRILSESG
LPIVAANDLEDAAKKAVAAIAKK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtccttcacagtgatcttttccgcgtcaacatggcggcatccatcgtatcccagact
gtagcgagaggactacgtggagcaagcgccaagcacttgtttcttgacaaattcaagtgt
gcacgggtgagttccaggcgatggctgaacctgcaggagtatcagagcaagaagctgatg
caggagagtggggttacagtccagcgcttctacgtggctgacaatgcccccgacgccctg
caggctgccaagagactcggtgccaaggagatagtcctgaaggcccagattctggctggg
ggacgagggaagggcgtgttcgacagtggccttaaaggtggagtgcacttaactaaagac
ccctcggcggtgggtgagctggccaataggatgctaggttatagcctgaccaccaagcag
actccaaaggagggagtgaaagtaaaaacggtgatggtggctgaagccctggacatcacc
agggaaacctactttgccatcctgatggaccgggcctgcaacgggcctgtcatggtgggc
agtcctcagggtgggatggacatagaggaggtggccgacaaaaccccagagctcatattt
aaggaagtcatagatatattcgagggggtgcgagacgaccaggcgctccgcatggcagct
aatttgggtttcaaaggacctctggagagacaggctgcagatcagattaagaggctctat
gctctgttcctgaaagtcgacgccactcaagttgaagtcaatcctctcggagagactccc
gaaggacaagtggtgtgctttgatgccaagatcaattttgacgataacgcagagttccgt
cagaaagccgtctttgccctggacgacatgtcagagagcgatcccaccgagacggaggca
gccaaatgggacctcaagtacatcggcttggatggaaacatcgcctgctttgtgaatggc
gctggtctggctatggccacgtgtgatatcatcgacctccatggagggaagccggccaac
ttcctggacctaggaggaggggtgaaggagaagcaggtgtacgaggcattcaaactgctc
actgctgacccgaaggtggaagccatcctggtgaacatcttcgggggcatcgtcaactgt
gccatcattgccaacgggatcaccaaggcttgccgtgagctggagctcaaagttcccctg
gttgtcaggctggaagggaccaatgtgcaggaggccaagaggatcctgtcagagagtgga
ctgcccattgtagccgccaacgacctggaagacgctgccaagaaagctgtggctgccatt
gccaagaagtag
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