Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413444
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Entry
139413444 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139413444
03012 Translation factors [BR:
ocla03012
]
139413444
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139413444
mRNA cycle factors
Stress granule specific factors
139413444
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-4
139413444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
139413444
NCBI-ProteinID:
XP_071016946
LinkDB
All DBs
Position
7:complement(51294870..51369825)
Genome browser
AA seq
1796 aa
AA seq
DB search
MSLPTKIVPKPATVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPSLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNTSSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQQQQPSGSQTPEQGQGQAHPAYSLEPPKQQQPT
PGAADSKPGPVYDKPKLEPVIRKPSSPGIGQPEPSMAWQEASAPVTAPSPPVEKELPSPA
PVMVAPIPAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLPPMTNSQTPNTVEPLPEAPH
TLAASPTLTPKALNGHADTGAELDTQAQEPSPLDPSPSPPQPQASTPAFREDCSEAVPSE
VRAEIPPAVTDSIAPITVVPVTLTSKPAPAFPAPPPGLPPLVQATAEASKPADTKDVPLK
AGTEAFITPDNKPEPQLQALSRKSPTTGCQAAPDAPKTWKKPNEESPVGDAQQRETEEEL
KPLEEAAGDQALPPARSCSTSPPPSAAPSALEAEERPPAPEENGEAEPMRNGAGHTSETE
SSDSGATPGDNEGSTGAPPDLFQEDLETNGKRQYKRDFLLGFQFMAACTQKPDGLPQISD
VVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGGAAVSHTHSQAHQMMNM
GGGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDDPEVITTQELFRKVRSIL
NKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVAYGNMCRCLTTLKVP
MTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSSDQERLRLELEEAKD
KARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFE
KAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADQGPKTIEQIHKEA
KIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRVQQRDETWNTVPMTKNSR
TIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSRSGGGGASLNRYSAL
QSTQSHQTTPPAQNLEYDTRRTLGSRSSAGRERSEKPLSPAPSRPGSFVRGGSAKELLES
PALSPEEPRRELESPSVSEDKTGPERSSAREPVKAEPVVAQSPDRPALSEEEMERKSRAI
IDEFLHISDYKEAVQCVDELDMSSQLHVFVRVGVESTLERSQITRDHMGKLLFQLVQQDI
LARSQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDRGFSMRELFSELSKPLLPV
GRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPEGEDVQDFISEQKLQFTEADC
SSHEAALATTALSLVVLNQQLERLLLEDMASDEQIFDWVEANLDESQMSSSPFLRALMTA
VCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQALYALQALIVTLDQPPNLLR
MFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVTAFFTWLREAEEESEDN
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtcccaaaacccgccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcaccctggtcctccctacacggctcat
gacatcacaaagggacaccctaacttggcgggcacaccgccagggcatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggagggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacaaccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacacttcatctctgcggcccggctctcagaaccccacagcg
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgccggggtctggcaccttctatcctggccctgggccg
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
cccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagcagcagcagccgagcggcagccagactccggagcag
ggccaaggccaggcccacccagcctacagcctggagccccccaagcagcagcagcccacg
cctggggctgcagacagcaaaccagggccagtatatgataagccaaaattggagccggtt
atccggaagccttcctctcccgggattggacaaccagaaccttctatggcgtggcaagag
gccagtgcacctgtaactgccccatctccccctgtagaaaaagagcttccctctcctgcc
ccagtgatggtggcgcccatccctgcccctcgtcctgttgccagccccaaccccattgag
cagccctctgcagtggagcctgctactcccactccctctgcagctgagcccaagaccctg
cctcccatgactaattcccagaccccaaacacagtggagcctcttccagaagccccacac
accctggctgcttcccccaccctaaccccaaaagctttgaatggccatgctgacactggg
gctgagctggacacccaggcccaggagccctcccccctagatccctctccctccccaccc
cagccccaggcttcaaccccggccttcagagaagactgtagtgaggctgtgcccagtgag
gtgagagcagagatcccccctgctgtcacggactctatcgcacccatcactgtagtgcca
gtcactctgacctccaaacctgcgcctgcttttccagcacctccccctggccttccacca
ctagtgcaggccacagcggaggccagcaagcccgccgacactaaagacgtccctctcaaa
gcagggacagaggcattcataacaccagacaacaagcctgaaccacagctacaagccctc
tccagaaagagtcccactacaggatgtcaggctgctcctgatgcaccaaagacctggaag
aaaccaaatgaagagagtcctgttggagatgcccaacagagggagactgaggaggagctc
aagcctttggaagaggctgctggagaccaggccctgccacccgccaggagctgcagcacc
tctcccccaccctcagcagctccctcagccctggaggcagaggagaggcccccagcccct
gaggaaaacggggaggctgagcccatgaggaacggagcaggacacacctcggagactgag
agcagtgatagcggggccacccctggggacaatgagggctccacaggagcacccccagac
ctcttccaggaagatctggagactaatgggaagcgtcaatacaaacgggacttcctgctg
ggctttcagttcatggctgcctgtacacagaagccagacgggctgcctcagatcagtgac
gttgtgctggacaagataaaccaaaacaagctgccaacccgggcggtagaatccagggtg
atctcccgaggccctgacttcacaccggcctttgctgactttggcagacagatgagtgga
ggacgcggcggagctgcagtgagtcacactcactcccaggctcaccagatgatgaacatg
ggggggggtgcccggcggcccccgcccaggaagattatcctgaacgtgtcagcgaatgaa
gaggtgcaactgaagaaggctgagaatgcctggaaacccggcatgaagagggcggggcca
tcagatgaccctgaggtcattacaacacaggagctcttccggaaggtgcgcagtatcctc
aacaaactgacgcctcagatgttcaaccagctgatgaagcaagtgacagacctcaccatc
gacacggaggagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgag
cccggcttctctgtggcctacgggaacatgtgtcgctgcctcaccacgctcaaagtgccc
atgacggacaaacccggaaccacagtgaacttccgcaaactgctgctcaaccgttgtcag
aaggagtttgagcgggacaaggtggatgatgtggtttttgaaaggaaacagaaggaactt
gactctgcacagtccagtgatcaagagagactacggttagagctggaggaggccaaggac
aaggcccgccggcgctccataggtaacatcaagttcatcggggagctgttcaagctcaag
atgctgacagaggccatcatgcacgactgcgtggtcaagctgctgaagaaccatgacgag
gaatcgctggaatgcctttgcaggctgctcaccaccatcggcaaggacctggactttgag
aaggccaagcctcgcatggatcagtatttcaaccagatggagaaaattgttaaggagcgg
aagacatcgtctcggatacggtttatgctgcaggacgtgatagacctccgattgcacaac
tgggtgtccaggagagctgaccagggccctaagaccatcgagcagatccacaaagaggcc
aagattgaggagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacacc
aagagaaggccagagcaacaacagcagcagagagaacagcaaagggagcagcagagggag
cagcgtgtgcaacagagagacgagacctggaacactgtgcccatgaccaagaacagcagg
acaatcgaccccaccaagatccccaagatctccaagcctcagatggatgagaagatccaa
ctaggaccacgagcctcactcaactggatgaagggcagcagcggaggggccaaggccagt
gactccgaattatcccggtctggtggtggtggtgccagtttaaaccggtactctgcactc
cagtccactcaatctcatcaaaccaccccaccggcacagaacctagagtatgacactaga
agaaccttgggcagtcgaagcagtgcagggagagagcgaagtgagaagcccctgagccca
gctccgtcgaggcccggttccttcgtccgaggcgggagtgccaaagagcttctggagagc
ccggccctgagccctgaggagccccgcagagagctggagagccccagcgtaagcgaggac
aaaactgggccagagcgcagcagtgccagggagcctgtgaaagcagagcctgtggtggcc
cagtctccagacagacctgccctctctgaggaggagatggagaggaagtccagagctatc
attgacgagttcttgcacatcagcgattataaggaggctgtacagtgtgtggatgagctg
gacatgtcctctcagctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgc
agtcagatcacacgggaccacatgggcaagctcctcttccagttggtgcagcaggacatc
ctggccaggtcccagttcttcaaagggtttgctgacacccttgagctggcggatgacatg
gccattgacattccccatatctggctgtatctggccgagctgctcagccctgtgctgaga
gacaggggcttctctatgagagagctctttagtgaattaagcaaacctttgcttcctgtg
ggaagagctgggatcttattttctgaaatactgcacatactatgcaaacaaatgagccat
aggaaagtgggcaccttgtggagagagtcgggcctcagctggagtgacttcttgccagag
ggagaggacgtccaggatttcatctcagagcagaagctccagttcactgaggcggactgc
tccagccatgaggcagccctcgccacgacagcactgtcccttgtggtgctcaaccagcag
ctagagagactgctgctggaggacatggccagtgatgagcagatctttgactgggtagag
gcaaatctagatgaatctcagatgagctcctctccgttcctgagagctctgatgacggct
gtgtgtaaggcagcggtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcatt
cagaggagattgcccgtattactcaagtaccttaactcagacactgagcgacagcttcaa
gcactttatgcactgcaggcgctgatagtcactttggatcagcctcctaacctgctccgg
atgttctttgattgtctgtatgatgaggacgtcatctcggaggacgctttttacaagtgg
gagaccagcaaagacccagcagaggagctgggcaagggtgtggctctcaagtctgtaacg
gctttcttcacctggctgagggaagccgaggaggagtcggaggataattga
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integrated database retrieval system
