Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413451
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Entry
139413451 CDS
T10872
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139413451
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GFIT
Other DBs
NCBI-GeneID:
139413451
NCBI-ProteinID:
XP_071016970
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Position
7:complement(52619158..52657797)
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AA seq
2031 aa
AA seq
DB search
MPGSLSNEDEGQEDMDFEDEIPDEDEDGQRNTVPLTPLDSFFTDNDSLKQQKKKKPKKMK
EGKMPKVKKRKKEQGCPCGGSDLKDQAPEREDDRPLQGPEIGSESESSTYAPTTKKKKKP
KDKKEKKPKRKKREEEEEDDDDDDDEDDENNKEPKSSSQLMQEWGLEDVQYGFTEEDYTT
LTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAV
ETVTVASPTSVKEITTLSSSQPGQIRKAKTKEGKGPGVRRKTKTVKEVKKKSKGRKTKSK
KKASSSEEDFGLEESDFDDVSIHSASVRSDTSGNAKKKARKGRKKRKREDGEGYETDHQD
YCEVCQQGGEIILCDTCPKAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDDDEEE
EVAVEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPP
KGKVQRILHWIWGDPPLPTEVPPGPDGETVDPLVKPPLKGHPERELFVKWAGLSYWHCSW
VSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPEYAAMEERFYRY
GIKPEWMVIHRILNHSYDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYHNAKHSYWDHR
EQMIGDDQRPLVVRKGKKGKEEEKRREREIPPNAPIIDPTIKFEHQPWYINATGGTLHPY
QLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIIN
WEREFEMWAPDFYVVTYTGDKESRAVIRENEFTFEDSAVKTGRKVFRMKKDTAIKFHVLL
TSYELITIDQTILGSINWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNL
EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSK
TELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAA
VEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEYE
GYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWN
PHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGS
MSKQELDDILKFGTEELFKDEMEAAARAMGSHQKLCKNNGDIKDGDEGSVIHYDDNAISK
LLDRSQNATEDTEIQNMNEYLSSFKVAQYVVKDEDAEEEPQREIIKQEENVDPDYWEKLL
RHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSEYSVGSEDEDEDFE
ERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDA
FNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGV
MSLVRKKVQEFEHVNGKYSTPDLIPIGLELKKLTESLSSDPNTPVPASPAATPQPPGSPV
PPEKMDSISGPAEDKEPTEQECKKLPELETHVSTESSSQVEKTDIAPDSDETEKGSTEDK
PVSSEESSEMTDIPSALIEPSINPKEPPSIQTELLSNQSSPKAEPCRETEKSLEKGDSDP
APAKPEEKELNPVVSDEAKSEDLLVPEGRLNGEKEAQEEMEEVRRELLEKNGFKMRFMFN
IADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYA
IHNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALN
TRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPNMLSRIP
PVSSRLQMSERSILSRLTSRGNEPPPQQPFGQGSFACSQMYSTGFGGSFRGPAGEAMVNY
SQMPLGPYVSVSNGPPPPSSHLDKKSCDHLRDVTTPDLKSGKPNDVICIED
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaatgaagacgagggacaagaggacatggattttgaagacgaa
ataccagatgaggatgaggatggtcaacgtaacactgtcccgctcacacctctggacagc
tttttcactgacaacgactccctcaaacaacagaagaagaagaaacccaaaaagatgaag
gagggcaagatgcccaaagtcaagaagaggaaaaaggagcagggatgtccctgtggtggc
agtgacttgaaggatcaggcccctgagcgggaggatgaccgtccactgcagggtccagag
attggctcagagagcgagagcagcacctacgcccctaccacaaagaagaagaagaaacct
aaggataagaaagagaagaaacccaaacggaagaagagagaagaggaggaggaggatgac
gatgatgatgatgacgaagatgatgaaaataacaaggagcccaagtcgtccagtcagctg
atgcaggagtggggtctggaggatgtgcagtatggcttcacagaggaggactatacaacc
ctcaccaactacaaggccttcagccagttcctcaggccacttattgccaagaagaaccct
aagatccccatgtcaaagatgatgacagtgttaggggccaagtggcgagagttcagcgcc
aacaaccccttcaaaggcacctctgcaactgctgtggctgctgcggtggctgctgccgtg
gaaacggtcaccgttgcctcgcccacctctgtcaaagagatcactacactgtcaagctct
cagcctgggcaaatcagaaaagccaaaaccaaagagggaaaggggcctggggttcgacgg
aaaacaaagactgtaaaggaggtaaagaagaaaagtaaagggaggaagaccaaatcaaag
aagaaagcatcctcgagtgaggaggactttgggctggaggagtcggactttgatgatgtc
agcatccacagtgcctcggtgcgctctgatacctcggggaatgccaagaagaaagcccgg
aagggtcggaaaaaaaggaaaagagaggatggggaaggctatgagacagaccaccaggac
tactgtgaggtgtgccagcagggaggggagatcatcctgtgtgacacctgtcccaaagcc
tatcacctggtgtgtctggaccctgagctggagaaagctcccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggaggccaaagatgatgacgatgaggaagag
gaggttgcggttgaggaagaggacgaccacctggagttctgcagagtgtgtaaagacgga
ggggagctgctgtgctgtgacacctgcccctcctcctaccatatccactgcctcaaccct
ccactgcctgagatacccaatggggagtggctgtgcccacgctgcatgtgtccacctccg
aaggggaaggtacagagaattctccactggatttggggggacccccccttaccaactgag
gtgccccctggccccgatggagagactgtggacccgctggtaaagccccccctgaagggc
cacccggagagggagctgtttgtcaagtgggctggtctctcctactggcactgctcctgg
gtcagtgaactgcagttggagctgtaccacgcggtgatgtaccgtaactaccagaggaag
aacgacatggacgagccccctccgtacgactacggctctggggaggaggagctgaacaac
gagaagaggaagagtaaagacccagagtacgctgccatggaggagagattctaccgctac
ggcatcaagccagagtggatggtcatccacaggatcctcaaccacagttatgataaggat
ggggatgtgcactacctgatcaagtggagagacctgccctatgaccagtgcacctgggag
gtggatgactttgacgtccctgagtatcacaacgccaaacactcctactgggaccacagg
gagcagatgattggtgacgaccagcgccctttagtggtgagaaagggaaagaagggcaaa
gaggaggagaagaggagggagagagaaatccctcctaacgctccaatcatagatcctacc
atcaagtttgaacatcaaccgtggtacatcaatgccactgggggaaccctacacccgtac
cagctggaggggttgaactggctgcggttctcctgggcacagggcacagacacaatcctg
gcagacgagatgggcctgggcaagactgtccagaccatcgtgttcctctactcactctac
aaggagggtcactccaaagggccatacctggtcagtgcccccctgtccaccatcatcaac
tgggagagggagtttgagatgtgggccccagacttctacgtggtgacctacactggggac
aaagaaagccgggcggtcatccgggagaacgagttcaccttcgaggacagtgcggtcaaa
acaggccgcaaggtcttccgtatgaagaaagacacggccatcaagttccatgtgttgctg
acgtcatatgagctaatcaccatcgatcagaccattctgggctccattaactgggcctgt
ctagtggtggacgaggcccacagactgaagaacaaccagtcaaagtttttcagaattctc
aatgggtataagatctactataagctgctactgactggcactcctctgcagaacaacctg
gaggagctgtttcacctgctcaacttcctcaccccagagagattcaataacctggagggg
ttcctggaggagtttgcagacatctccaaggaggaccagatcaagaagctgcatgatctg
ctgggcccacacatgctcaggagactgaaggctgacgtcttcaagaacatgccttccaag
acagagctcattgtacgagtggagctcagccccatgcagaagaagtactacaagtttatc
ctgacgcggaactttgaggcgctcaactccaagggcgggggcaaccaggtgtccctgctc
aacatcatgatggacctgaagaagtgctgcaaccacccatatctgttccccgtggcagcc
gtggaggcaccagtgttacccaatggctcttatgatgggaaccagctggtcaagtcctca
ggcaaactcaccctgctccagaagatgttgaagaaactcaaagatgaaggacacagagtt
ctcatcttctcccagatgactaagatgctggatctgcttgaggactttctggaatacgag
ggctacaaatatgaacgcattgatggaggcatcacagggggactacgacaggaggctatc
gaccgcttcaacgcaccgggtgctcagcagttctgcttcctgctctccacccgagctgga
ggcttgggcatcaacctggccacggcagacaccgtcatcatctacgactcagactggaac
cctcacaacgatatccaggcattcagcagggcccaccgtataggtcagaataagaaggtg
atgatctatcgctttgtgacgcgagctagtgtggaggagcgcatcacccaggtggccaag
aggaagatgatgctgacccacctggtggtgaggcctggcctgggctccaagaccggctcc
atgtccaaacaggagctggacgacatcctcaagttcggcaccgaggagctcttcaaggac
gagatggaggcagctgcacgggccatgggttcgcatcaaaaactctgtaagaataatggg
gacataaaggatggagatgagggcagtgtcattcactatgatgacaatgccatctccaag
ctgctggaccgtagccagaatgccacggaggacactgagatccagaacatgaacgaatac
ctcagctccttcaaggtggcccagtatgttgtcaaagacgaggacgcagaggaggagccc
cagcgggagatcattaagcaggaggagaatgtggatccagactactgggagaagctgctg
aggcaccactatgagcagcagcaggaggacctggcccgcaacctgggcaaaggcaaacgc
atccgcaagcaggtcaactacaacgacacgtctcaggaggaccaagagtggcaggatgat
ctttcagacaatcattccgagtactccgtggggtccgaggacgaggacgaagatttcgag
gagaggccggaaggtgggcgcaggcattctcgcaggcagctgaagagtgacagggacaaa
cctctgccacccctgctggcacgcgtagggggcaacatcgaggtgctggggttcaacgcc
cgtcagcggaaggccttcctcaacgctatcatgcgctggggcatgcctcctcaggacgcc
ttcaactctcactggctggtcagagacctaagagggaaaagtgagaaagagttcagggcc
tacgtgtccctgttcatgagacatctttgtgagcccggggcagacggggcggagaccttt
gcagatggggttccacgagaagggctgtcccgtcagcatgtcctcaccaggattggggtt
atgtctctggtcaggaaaaaggtccaggagtttgagcatgtcaatgggaaatacagcact
ccagacctgatccctattggactggagctgaagaaactgactgagagtctgtcctctgac
cccaacacccctgtccctgctagcccagctgccacaccccagcctcctggaagtcctgtc
ccaccagagaagatggactcgatctcagggcctgctgaagacaaggagcccacagaacag
gaatgcaagaagctaccagaactggagactcatgttagtacagagtcatcatcccaggta
gagaagacagacatcgctcctgacagtgatgagacagagaaaggcagcacagaggacaaa
ccagtctcctcagaggagagtagtgaaatgacagacataccctccgcactgatagagcca
tccatcaatcctaaagagcctccatccatacagacagagctgttgtccaatcaaagctca
ccaaaagcggagccctgtcgagagacagagaagtccttagaaaaaggagacagtgatcct
gctccagccaaacccgaggagaaggaactgaatccagttgtttcagacgaggccaagagc
gaggacttgctcgtgcccgagggacggctgaatggagaaaaagaagcacaggaggagatg
gaggaggtcaggagggaattactggagaagaatggtttcaagatgaggttcatgttcaac
attgccgacggaggcttcacagagctgcacaccctgtggcagaacgaggagcgggctgcc
gtgtcatctgggaagatgtatgacatctggcaccgtcgccacgactactggctactggct
ggcatcgtaacacatggctatgcccgctggcaggacattcagaacgacccacgctatgcc
atccacaatgagcccttcaagactgagatgcacaagggaaattacctggagatgaagaac
aagttcctggctcgtcgctttaagctgttggagcaggctctggtgatagaggagcagttg
aggagggcagcgtacctgaacatgacccaggaccccagccatccggccatggccctaaac
actcgctttgctgaggtggagtgtctggctgagtctcaccagcacctgtccaaggagtct
ctggctggaaacaagccagccaacgctgtgctgcacaaagtactgaaccagctggaggag
ctgttaagtgacatgaaggcggatgtgacgcggcttcccaacatgttgtcccggatcccc
ccagtgtcttcgcgtctgcagatgtctgagaggagtatcctcagccgcctcaccagccgc
ggcaacgaacctccgccccaacagccgttcggccagggctcatttgcctgttcccagatg
tacagcactggctttggaggcagtttccgggggcctgcaggtgaagccatggtcaactat
agccagatgcccctgggaccctatgtcagtgtgtccaacggcccccctcctccatccagc
cacttggacaagaagtcctgcgaccacctgagggatgtcaccacccctgaccttaagtca
ggcaagcccaatgatgttatctgtattgaagattag
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