KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413518
Entry
139413518         CDS       T10872                                 
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008  Ribosome biogenesis in eukaryotes
ocla03013  Nucleocytoplasmic transport
ocla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139413518
   03008 Ribosome biogenesis in eukaryotes
    139413518
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    139413518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocla03019]
    139413518
   03009 Ribosome biogenesis [BR:ocla03009]
    139413518
   03016 Transfer RNA biogenesis [BR:ocla03016]
    139413518
   03036 Chromosome and associated proteins [BR:ocla03036]
    139413518
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     139413518
Ribosome biogenesis [BR:ocla03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    139413518
  Pre-60S particles
    139413518
Transfer RNA biogenesis [BR:ocla03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    139413518
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     139413518
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3 Rap1a
Other DBs
NCBI-GeneID: 139413518
NCBI-ProteinID: XP_071017113
LinkDB
Position
1:complement(84812688..84892467)
AA seq 1071 aa
MPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRLAQEVLTQLKEHPDAW
TRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATMV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGKINT
QLNPSNPGNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcagttatgacagtgttagcagaccatgcagcgcagcagctgctagacttcagc
cagaaactagacatcaacctgttggacaacgtggtcaactgtctgtaccacggggtcgga
acacagcaaaggctggctcaggaggttctgacccagctgaaagagcacccggatgcttgg
accagagtggacaccatactggagttctcccagagcatgaacaccaaatactatgctctg
cagattctggaaacagttatcaaaacaagatggaagattctacccagaaaccagtgtgaa
ggtattaaaaagtatgttgttggactaattatcaagacgtcgtcggatgctacaatggtt
gagaaagagaaagtatacattggaaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccacgttcatcagtgacatcgtgggagccagccgcaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtgtttgac
ttctctagtggacagatgacccaggtcaaggccaagcatctcaaagacagcatgtgcaac
gaattctcccagatattccagctctgccagtttgtcatggagaattcccagaatgcacca
ctggtccacgccactctagaaacgctgctgaggtttctcaactggattcctcttgggtac
attttcgagaccaaactcatcagcacactcgtctacaagttcctgaacgtgccgatgttc
cgcaacgtgacgttgaagtgtctgacggagatcgccggcgtcagtgtcagccaatacgag
gagcagtttgtcaacctcttcacgctcaccatgtgtcaactcaaacagatgcttcccctg
aacaccaacatccgtctggcgtattccaacggtaaggatgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaggagcacggtcagctcatcgagaagagg
cccaacctccgagagacactgatggaggctctccactacatgttgttggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccatctggctgcagagctt
tacagggagagtcccttctccacctccacctcccccctgctgtctggatcacaacacttt
gatgtccctcctcgcagacagctctacctgcctgtactctccaaggtgcgtctgctgatg
gtgagccgcatggccaagccggaggaggtgctggtggtggagaacgaccagggagaggtg
gtacgagagttcatgaaggacacagactccatcaacctctacaagaacatgagagagaca
ctggtgtacctgacccatctggactatgcagacacggagcgtataatgacagagaagctt
cataaccaggtgaacggaacagagtggtcctggaagaacctcaacacactgtgctgggct
atagggtccatcagtggagccatgcacgaagaggacgagaagaggttcctggtcaccgtc
atcaaggatctgctgggtctatgtgaacagaagaggggaaaggacaataaggccatcatt
gcctccaatatcatgtacattgtgggccagtaccctcgcttcctcagagcccactggaag
ttcctcaagaccgtcgtcaataaactctttgagttcatgcacgagacccatgatggggta
caggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgtcgccattttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaatatcaacacc
atcatctgtgacctgcagccacagcaggtccatacgttctacgaggccgtggggtacatg
atcggagcccagacagaccaggcagtacaagagcatatcatagagaaatacatgttactg
cctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtggacattctgaag
gacccagagacggtgaagcagctcggcagcatcctgaagaccaacgtccgggcctgtaag
gccgtgggacaccccttcgttatccagttaggacgcatttatctggacatgctcaacgtc
tacaagtgcctcagcgaaaacatctccgcagccatccagaccaacggagagatggtgacg
aaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctcaaactaatctcc
ggctgggttagcagatccagcgatccacagatggtgggggagaactttgttccgccgctg
ctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgggagcccgaggtc
ctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcactggggagatcccg
cagatcttcgatgccgtgttcgaatgcacgctcaacatgatcaataaagactttgaggag
tacccggaacacaggactcatttcttctacctgctgcaggcggtcaactcccattgtttc
ccagcattcctggccatccctccggcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctctacactcta
ctgcagaacgtgacccaggaagaggctgcagcacagagcttctaccagacatacttctgt
gacatcctccaacacatcttctctgtggtcactgacacatcacacactgctggcctgacg
atgcatgcctccatcctgacctacatgtttaacctggtggaggaagggaagatcaacacc
cagctcaacccctccaaccccggcaacaaccaggtcttcatacaggagtacgtggccaac
ctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtgttcgtaacagga
ctgttcagtctaaaccaggacattgcagccttcaaggaacacctgagggacttcctggta
cagattaaggagtttgcaggggaggacaccacagacctgttcctagaggagcgggaggcg
tcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagttcccggtatcctc
aacccacacgaaatacccgaggagatgtgtgattga

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