Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413518
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Entry
139413518 CDS
T10872
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
ocla03013
Nucleocytoplasmic transport
ocla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139413518
03008 Ribosome biogenesis in eukaryotes
139413518
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139413518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139413518
03009 Ribosome biogenesis [BR:
ocla03009
]
139413518
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139413518
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413518
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139413518
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
139413518
Pre-60S particles
139413518
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
139413518
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
139413518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
Rap1a
Motif
Other DBs
NCBI-GeneID:
139413518
NCBI-ProteinID:
XP_071017113
LinkDB
All DBs
Position
1:complement(84812688..84892467)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRLAQEVLTQLKEHPDAW
TRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDATMV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGKINT
QLNPSNPGNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRDFLV
QIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacagtgttagcagaccatgcagcgcagcagctgctagacttcagc
cagaaactagacatcaacctgttggacaacgtggtcaactgtctgtaccacggggtcgga
acacagcaaaggctggctcaggaggttctgacccagctgaaagagcacccggatgcttgg
accagagtggacaccatactggagttctcccagagcatgaacaccaaatactatgctctg
cagattctggaaacagttatcaaaacaagatggaagattctacccagaaaccagtgtgaa
ggtattaaaaagtatgttgttggactaattatcaagacgtcgtcggatgctacaatggtt
gagaaagagaaagtatacattggaaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaagcactggcccacgttcatcagtgacatcgtgggagccagccgcaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgaggaggtgtttgac
ttctctagtggacagatgacccaggtcaaggccaagcatctcaaagacagcatgtgcaac
gaattctcccagatattccagctctgccagtttgtcatggagaattcccagaatgcacca
ctggtccacgccactctagaaacgctgctgaggtttctcaactggattcctcttgggtac
attttcgagaccaaactcatcagcacactcgtctacaagttcctgaacgtgccgatgttc
cgcaacgtgacgttgaagtgtctgacggagatcgccggcgtcagtgtcagccaatacgag
gagcagtttgtcaacctcttcacgctcaccatgtgtcaactcaaacagatgcttcccctg
aacaccaacatccgtctggcgtattccaacggtaaggatgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctgaaggagcacggtcagctcatcgagaagagg
cccaacctccgagagacactgatggaggctctccactacatgttgttggtgtctgaggtg
gaggagacagagatctttaagatctgtctggagtactggaaccatctggctgcagagctt
tacagggagagtcccttctccacctccacctcccccctgctgtctggatcacaacacttt
gatgtccctcctcgcagacagctctacctgcctgtactctccaaggtgcgtctgctgatg
gtgagccgcatggccaagccggaggaggtgctggtggtggagaacgaccagggagaggtg
gtacgagagttcatgaaggacacagactccatcaacctctacaagaacatgagagagaca
ctggtgtacctgacccatctggactatgcagacacggagcgtataatgacagagaagctt
cataaccaggtgaacggaacagagtggtcctggaagaacctcaacacactgtgctgggct
atagggtccatcagtggagccatgcacgaagaggacgagaagaggttcctggtcaccgtc
atcaaggatctgctgggtctatgtgaacagaagaggggaaaggacaataaggccatcatt
gcctccaatatcatgtacattgtgggccagtaccctcgcttcctcagagcccactggaag
ttcctcaagaccgtcgtcaataaactctttgagttcatgcacgagacccatgatggggta
caggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgtcgccattttgtc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaatatcaacacc
atcatctgtgacctgcagccacagcaggtccatacgttctacgaggccgtggggtacatg
atcggagcccagacagaccaggcagtacaagagcatatcatagagaaatacatgttactg
cctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtggacattctgaag
gacccagagacggtgaagcagctcggcagcatcctgaagaccaacgtccgggcctgtaag
gccgtgggacaccccttcgttatccagttaggacgcatttatctggacatgctcaacgtc
tacaagtgcctcagcgaaaacatctccgcagccatccagaccaacggagagatggtgacg
aaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctcaaactaatctcc
ggctgggttagcagatccagcgatccacagatggtgggggagaactttgttccgccgctg
ctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgggagcccgaggtc
ctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcactggggagatcccg
cagatcttcgatgccgtgttcgaatgcacgctcaacatgatcaataaagactttgaggag
tacccggaacacaggactcatttcttctacctgctgcaggcggtcaactcccattgtttc
ccagcattcctggccatccctccggcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctctacactcta
ctgcagaacgtgacccaggaagaggctgcagcacagagcttctaccagacatacttctgt
gacatcctccaacacatcttctctgtggtcactgacacatcacacactgctggcctgacg
atgcatgcctccatcctgacctacatgtttaacctggtggaggaagggaagatcaacacc
cagctcaacccctccaaccccggcaacaaccaggtcttcatacaggagtacgtggccaac
ctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtgttcgtaacagga
ctgttcagtctaaaccaggacattgcagccttcaaggaacacctgagggacttcctggta
cagattaaggagtttgcaggggaggacaccacagacctgttcctagaggagcgggaggcg
tcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagttcccggtatcctc
aacccacacgaaatacccgaggagatgtgtgattga
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integrated database retrieval system