Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413519
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Entry
139413519 CDS
T10872
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04514
Cell adhesion molecules
ocla04672
Intestinal immune network for IgA production
ocla04810
Regulation of actin cytoskeleton
ocla04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139413519
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin beta subunits
139413519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139413519
NCBI-ProteinID:
XP_071017109
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Position
7:complement(56683958..56695971)
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AA seq
767 aa
AA seq
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MVGFFLLGTFILYCVGQIQIQGIPQICVSQPSCSACLRSPGCAWCKHKDFLKSGESTERR
CDTAESLRTRGCEQTDIINPQSELVFLKNNELSSDPDNVVQLKPQNLLFKLRVGVPQTFS
VSFKRAEGYPIDLYYLMDLSFSMRDDLDTIKNLGQEILSTLKNVTNKVRIGFGSFVDKVA
LPYVSQVKDKKNNPCPSRLYTCQPAFSFQNILGLTQDVAEFKTRVSNQIISGNLDSPESG
FDAIMQAAVCQGVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPNDGKCHLNGSGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEESVAAYKALSKLIPQSVLGVLKNDSSNVVQLI
LEAYSNLSSTILLEHHGAPSGLDVTYRSHCTPAEGDNTPWQRRGECMNVKLNQQVDFTVS
LNISMSEGECLKEKKQFFLKLQGISETLKVSVETLCDCDCHDREQQSTHCNEKGTLNCGI
CSCDEDHLGQRCECEQPKDMISADSMDTTCRQDSSPLLCSGHGSCECGICVCQGTHRGDF
CQCDDNSCDRHNNMLCSGNGQCDCGTCKCHANYTGSACDCSTLTDQCRTAGKLCNGQGTC
QCNQCQCNNDFFGMSCSKIANACAKFLACVTCELANKESDGLKSNCSRPCGSVKPTWVEG
PQEFPCREDTISYKVELVPDGNILVLYADLPRSVDKTYVIIGSSVSSIIFIGIAVILISW
LMLEFHYRREYASFLKATETVVWKNIENPLFQDATTIVMNPIHIQED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggttggcttctttttattaggaacctttattttgtactgtgtgggacagatccaaatt
caagggatcccccaaatatgtgtgtcccagccctcatgttcagcctgcctgaggagccct
ggatgtgcttggtgcaaacacaaggatttcctgaagtctggggagtccactgagcggagg
tgtgacactgctgagtctctgaggaccagaggctgtgagcagacagacatcatcaacccc
caatcagaactggtcttcctaaagaacaatgagctcagcagcgacccagacaatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcagt
gtgtcattcaagagagccgagggctaccccatagacctgtactacctaatggacctgtcc
ttctccatgagggacgacctggacaccatcaagaatctgggccaggaaatcctctctacg
ctaaaaaacgtcaccaataaggtccgcataggctttggctcatttgtggacaaggtggct
ctgccgtatgtcagccaggttaaggacaagaagaacaacccctgccccagccgcctgtac
acctgtcaacctgcgttcagcttccagaacattctgggactaacccaagacgtggctgag
ttcaagaccagggtcagcaaccagatcatctctggaaacctggactcccccgagtctggc
tttgacgccatcatgcaggcagctgtctgccagggtgtgattggttggaacaatgtcacc
cggatcctggtttacacgtcagatgacaccttccacattgccggggacggcaggctggct
gggatattcgaacctaatgatgggaagtgtcatctcaatggcagcggcttctacgatggc
actaaatatgactacccatcggttggccagctcgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaggaaagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtgctgggagtcctgaagaatgactccagcaacgtggtccagctcatc
ttagaggcctacagtaacctgtcctccactatcttattggagcaccatggagccccctca
ggtctggacgtgacctacagatcccactgcacccctgcagaaggggacaacaccccgtgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggttgacttcacagtgagt
ctgaatatttcaatgtctgaaggagaatgtctgaaggagaagaagcagtttttcctcaaa
ctgcagggcatcagcgagaccctgaaggtctccgtggaaaccctgtgtgactgtgactgc
catgacagagaacagcagtctacacactgcaatgaaaagggaacgctcaactgtggaatc
tgcagctgtgacgaggatcacctgggtcaaaggtgtgagtgtgagcagcctaaggacatg
atctctgccgactctatggacacaacatgtcgccaagacagctccccgctgctatgcagc
gggcacgggagctgtgagtgtggcatatgtgtgtgccagggcacccaccgtggtgatttc
tgccaatgtgatgacaacagctgtgaccgccacaacaacatgctctgcagtggtaatggg
caatgtgactgtggaacatgtaagtgtcatgccaactacacaggctctgcgtgtgactgt
tccaccctcaccgaccagtgcaggactgctgggaagctgtgcaatggccagggaacatgc
cagtgtaaccagtgccagtgcaacaatgacttctttggcatgagctgctcaaagattgct
aatgcatgcgcaaaattcctggcctgtgtgacgtgtgaattggccaataaggaaagtgac
ggactaaagagtaactgtagccgaccatgtggctcagtcaagcccacttgggttgaggga
ccccaggagttcccctgcagagaagacaccatctcctacaaagtggagctggtccctgac
ggcaacatcctggtcctctacgcagatctgccccgctctgttgacaagacttatgtgatc
attggcagctcggtgtccagcatcatcttcattgggatcgcagtgatcctcatcagctgg
ctgatgctggagttccactaccggagagagtacgccagcttcctcaaagcaacggagact
gtagtctggaaaaatatcgaaaatcctttgttccaggacgccacaaccatagttatgaac
cccatacacattcaagaggactga
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