Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413538
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Entry
139413538 CDS
T10872
Name
(RefSeq) paired box protein Pax-2a-like isoform X1
KO
K15608
paired box protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139413538
04131 Membrane trafficking [BR:
ocla04131
]
139413538
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413538
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139413538
Membrane trafficking [BR:
ocla04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
139413538
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
139413538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
Motif
Other DBs
NCBI-GeneID:
139413538
NCBI-ProteinID:
XP_071017141
LinkDB
All DBs
Position
1:85210850..85271967
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AA seq
425 aa
AA seq
DB search
MDIHCKVDPFSAMHRHGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQLRVS
HGCVSKILGSYQKDFKRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEI
RDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSAPGHTMVPSQASPPVTS
PSNDPVGSYSINGILGIPRSNGEKRKRDEDGSDGSGPNTDSQVSVDSLRKHLRADAFTQQ
QLEALDRVFERPSYPDVFPTSEHIKPEQANEYSHSHSLSSLNPGLDGEVKPSLSSSSNQN
LGPSVSVTQSYSVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFTGNPYSHPQ
YTTYNEAWRFSNPALLMPHPEVPDHLLLPRHMTATSYHGNQINHHHHHLHHDYNHGFGSV
HVAPV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagtagacccgttctcagcgatgcaccggcacggcggtgtgaac
cagctaggcggggtgtttgtcaacggcagacccctacctgacgtggtgaggacaagaatc
gtggaactcgcgcaccaaggagtgagaccctgtgacatttcgagacaactacgggtcagc
cacggctgtgtcagcaaaatactgggcagctatcaaaaggattttaaaagatactacgag
accggaagtataaagccaggagttattggtgggtccaaaccgaaagtggcgactccaaag
gttgtggataaaatagcggactacaagcgccagaatccgaccatgttcgcgtgggaaatc
agagacagactgttagctgagggcgtctgtgacaacgacacggttccaagcgtctcgtcc
attaacaggataatacgaacaaaagtccagcagcctttccacccgtctccagatggaaca
tccctgtctgccccaggccacaccatggtaccgagccaggcctctccacctgtaacaagc
ccttccaacgaccctgtggggtcctactccatcaacggcatcctgggtattccccggtca
aacggcgagaagaggaaacgagatgaagatggttcagatgggtctggcccaaacactgat
tctcaggttagtgtggacagtttacggaagcacctgcgggccgatgctttcactcagcag
cagctggaagctttggaccgggtctttgagcgcccgtcgtaccccgacgtcttcccgacc
tcggagcacatcaaaccagaacaggctaacgagtactcccactcccactccctgtcctcc
ctgaatcctggtctggacggcgaggtcaaacccagcctgtcctccagcagtaaccagaac
ctgggccccagtgtctctgtgacgcagagctactctgtaggtcgagacatggccaacaca
accctaccgggttatccccctcacgttccccccaccggccaaggcagctaccccacctca
acactggccggaatggttcctgggagtgagtttacaggaaacccttacagtcatccacag
tacacgacctacaacgaggcatggcggttcagcaacccagcattactaatgccacatcca
gaggttccggaccacctactgctgccacggcatatgaccgccactagttaccatggaaac
caaatcaaccaccaccaccaccacctacaccatgactacaaccatggcttcggcagcgtc
catgttgccccggtgtga
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