Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413543
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Entry
139413543 CDS
T10872
Name
(RefSeq) ras-related protein rab7-like isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
ocla04144
Endocytosis
ocla04145
Phagosome
ocla04148
Efferocytosis
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139413543
04145 Phagosome
139413543
04140 Autophagy - animal
139413543
04137 Mitophagy - animal
139413543
04148 Efferocytosis
139413543
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139413543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413543
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139413543
04031 GTP-binding proteins [BR:
ocla04031
]
139413543
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
139413543
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139413543
Exosomal proteins of other body fluids (saliva and urine)
139413543
Exosomal proteins of colorectal cancer cells
139413543
Exosomal proteins of bladder cancer cells
139413543
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
139413543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
PduV-EutP
nSTAND3
AAA_16
Septin
AAA_22
AAA_7
AAA_24
NTPase_1
AAA_5
ATPase_2
NACHT
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
139413543
NCBI-ProteinID:
XP_071017143
LinkDB
All DBs
Position
7:57844499..57864074
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKDNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSAEACSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaggaagaaagtgctcctgaaagtcatcatccttggtgattctggagttggg
aagacctccctgatgaaccagtatgtgaataggaagttcagtaaccagtacaaagccaca
ataggagctgacttcctgaccaaggaggtgatggtggacgatcggctcgtcacaatgcag
atctgggacacggcagggcaggagaggttccagtctctgggtgtggcgttctaccgcggg
gcagactgctgtgtgctggtgtttgatgtgactgctcctaacaccttcaagactctagac
agctggagggacgagttcctcatccaggccagtcccagggaccccgagaacttccccttt
gtggtgctaggcaacaagatcgacctggagaacagacaggtgacgaccaagcgagctcag
gcatggtgtcagagtaaggacaacatcccttactttgagaccagtgctaaggaggccatc
aacgtagagcaggccttccagaccatcgcacgcaatgccctcaaacaggagacggaggtg
gagctgtataacgaattcccggaacccatcaagctggacaggaatgatcgagcaaagcct
tcagcagaggcctgcagctgctga
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