Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413549
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Entry
139413549 CDS
T10872
Name
(RefSeq) ruvB-like 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
ocla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139413549
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139413549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413549
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139413549
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139413549
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
139413549
Chromatin remodeling factors
SRCAP complex
139413549
INO80 complex
139413549
INO80 complex (yeast)
139413549
SWR1 complex
139413549
ASTRA complex
139413549
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Dynein assembly factors
139413549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
AAA_16
AAA_5
AAA_19
Mg_chelatase
AAA_18
AAA_28
Sigma54_activat
IstB_IS21
AAA_25
DnaB_C
bpMoxR
PhoH
nSTAND3
Parvo_NS1
Zeta_toxin
AAA_7
TsaE
AAA_11
ResIII
MamS_MamX
RNA_helicase
ATPase
SLFN-g3_helicase
AAA_33
NPHP3_N
DEAD
Motif
Other DBs
NCBI-GeneID:
139413549
NCBI-ProteinID:
XP_071017154
LinkDB
All DBs
Position
7:complement(57602273..57612656)
Genome browser
AA seq
456 aa
AA seq
DB search
MKIEEVKSTTKTQRIASHSHVKGLGLDDAGNAKQNASGLVGQETAREACGIIVELIRSKK
MSGRAVLLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAI
GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTGKGTKQLKLDPSIYESL
QKERVEAGDVIYIEANSGAVKRQGRCDTFATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL
HDLDIANARPQGGQDILSMMGQLMKPKKTEITDKLRAEINKVVNRYIDQGVAELVPGVLF
VDEVHMLDIECFTYLHRALESTIAPIVVFASNRGNCLIRGTEDISSPHGIPLDLLDRVMI
IRTMLYTPQEMKQIIKIRAQTEEINISEEALSHLGEIGTKTTLRYAAQLLTPASLLGRVQ
GKEGVEREQVEEINELFYDAKSSAKILQDQQHKYMK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaggaagtcaaaagcaccacgaaaacccagcgcatcgcgtctcacagtcat
gtgaaaggactcggactagacgatgccgggaacgcaaagcaaaatgcgtcaggtcttgtt
ggacaggagaccgcaagagaggcttgtggtatcattgtggaactgatccgctcaaagaag
atgtcgggaagggcagttttacttgctggacctcccggtacaggaaagaccgccttggct
ttggctatggcacaggagctcggcaacaaggtgcccttctgccctatggtgggcagtgag
gtctactcttctgagatcaagaaaacagaggtgctaatggagaacttcaggagggccata
gggttacgtattaaggagaccaaggaggtgtatgagggggaggtcacagagctgaccccc
tgtgagacagagaatcccatgggtggttacgggaagaccatcagccacgtcatcatcgga
ctgaagaccggcaagggcaccaagcagctcaagctggaccccagtatttatgagagcctg
cagaaggagcgtgtggaagcgggagacgtcatctacattgaagcaaacagtggcgccgtc
aagagacaaggtcggtgtgacacatttgccacagagtttgacctggaggctgaggagtac
gtgccgctgcctaagggggacgtccacaagaagaaagagattatccaagacgtcacgcta
cacgacctggatattgccaatgctagaccacagggaggtcaagatatcctgtctatgatg
ggacagctgatgaagcccaagaagaccgagatcacagacaagctgcgagctgagatcaac
aaggtggtaaaccgctacattgaccagggtgtggctgagctggtccctggggtgctgttt
gtggacgaggtacacatgctggacatcgaatgtttcacctacctgcaccgagctctggag
agcaccatcgcacccatcgtagtattcgcctccaacaggggcaactgcctcatcaggggg
acagaggacatcagctctcctcatggcattcccctggacctgctggaccgagtcatgatc
atccgcaccatgctctacacaccgcaggagatgaagcagatcattaagattcgtgctcag
actgaggagatcaacatcagtgaggaggccctcagtcacctgggagagatcggaaccaag
accacactccggtatgcggctcagctgctgaccccagccagtctgttaggcagagtccaa
gggaaggagggagtagagagggagcaggtggaggagatcaacgaactcttctacgatgcc
aagtcctccgctaagatcctccaggaccagcagcacaagtacatgaaataa
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