Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413575
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Entry
139413575 CDS
T10872
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139413575
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139413575
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
139413575
NCBI-ProteinID:
XP_071017192
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Position
7:complement(60117011..60121017)
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AA seq
418 aa
AA seq
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MEMERIQRAQPPPKYQQAELSDMQGMDFPIYVYKSRRGMKRAEECKENYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILALQNG
MQIEQSSPSQENSEGMFRSGFHVCAQEVLQYLANQEGDGDLTPSHMINHLHKVATEILQG
PPHSPWPEKTPSYHHHQALREKPVGQPPKPSEGHRKNCVPVIQRAYAQVGGEQSGSDTDT
DSGYGGEQGEHLALRAGYYGQESHLKRALGEKTASLGVKQEDEPRHKHARVESSDDEFLS
GGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAMPMIY
PGLGGSAQGMPSDTHAQTSLITISPRGHSPSPPTVAQSPMDSPALLQALKPINLETKD
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattcaaagggcgcaaccccctcccaagtaccagcaggctgagctg
tctgacatgcaagggatggatttccctatatatgtatacaaatcccgtcggggaatgaaa
cgagcagaggaatgcaaggaaaactacaaactacctcatcgacttattgagaagaaaagg
cgagacaggataaacgagtgcatcgctcagttgaaagatttattgcctgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggaactcacgctcaagcatgtg
aaagccctcaccactctactggaaaaccagcagcagaaaatcctggctctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagcgaggggatgttccgctcaggc
ttccacgtctgtgcccaggaggttttacagtacctggccaaccaggagggtgacggagac
ctcacaccctcccacatgatcaaccacctgcacaaggtggccaccgagatcctccagggc
cctccccacagcccctggcccgaaaagacccccagctaccaccaccaccaggccctgagg
gagaagcctgtaggccagccccccaaacccagcgagggccacaggaagaactgtgtgccc
gtcatacagcgggcgtatgcccaggttggcggtgagcaaagtggcagtgatacagacaca
gacagcggctacggtggcgagcagggtgagcatctggcgttgcgtgcagggtactatggc
caagagagccatctgaagagagccctgggcgaaaagacggcgtcattgggcgtcaagcag
gaagatgaacctcgccacaaacatgcccgggtggagtcatccgatgacgagtttctctca
ggtggagagtcatcctcatcctcctccagcggtcacggcagctacatgagcgcctactcc
ccccaccaggcccaacctcatcctctctgcatgcccttctacctcatccccccttctgct
gccgcttatctgcccatgctggagaagtgctggtactctggggccatgcccatgatctac
cctggcctggggggctccgcacagggcatgcctagcgacacgcatgcccaaacttccctg
attacgatatcccccagggggcactctccctctccccccaccgtggcccagagccccatg
gactcaccagccctcctccaagcgttaaagcccattaacctggaaaccaaagactga
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