Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413577
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Entry
139413577 CDS
T10872
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139413577
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139413577
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
ig
V-set
fn3
Ig_2
LRR_EndoS
Pur_ac_phosph_N
LRRCT
LRR_Zer-1
LRRNT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
139413577
NCBI-ProteinID:
XP_071017198
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All DBs
Position
7:complement(60383860..60403891)
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AA seq
715 aa
AA seq
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MTLSPLPWPPLAWLCVGLLLPLLPLVRGGECPRLCVCEVRPWFTPQSTYREAATVDCNDL
RLTRIPSNLSSDTQVLLLQSNSIAHTSGELEALFNLTELDLSQNNFSSVEAVGLANMNQL
TTLHLEENQISQLPDHCLQDLSNLQELYINHNQISTIAPGAFSGLRSLLRLHLNSNRLRV
IDSRWFEATPNLEILMIGDNPVIGILDMNFKPLGSLRSLVLAGMDLTDVPGSALVGLDNL
ESLSFYDNKLVRVPQLALQKVQNLKFLDLNKNPVHKIQEGDFRNMLHLKELGINNMAELV
SIDRYALDNLPELTKLEGTNNPKLSFVHRTAFRDVSSLESLMLNNNALNAIYQRTVEALP
NLREISLHSNPLRCDCVIQWMSSNRTSVRFMEPRAMLCSSPPELRGQQVREVRLQDSPEQ
CLPLISHNTFPSHLSLELGMSVSLDCRAMAEPEPEIYWVSPMGSKITVDMVSERYHLSSE
GTLRLSQVQVEDSGRYTCVAQNTEGADTRVTTIRVNGTLLDSVEVMKIYVKQTESHSILV
SWKINSNVMTSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPGTEYEVCLTVSNI
HLQTHKSCVNVTTRSNTFALDVSDQRPSAALLVVMATMLAFLSLATVGVYVARRWKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWEVDSEKDKEGGAESKPSPVDTTRSYYMC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgactctaagccccctcccttggcccccactggcatggctgtgtgtagggctgctgttg
cccctgctgcccctggtgcggggcggggagtgcccgcggctgtgcgtgtgtgaggtgcgc
ccctggttcaccccccagtccacctacagggaggcggccacagtggactgcaacgacctg
cggctgacacgcatcccctccaacctatcctctgacacccaggtgctgctgctccagagc
aactccatcgcccacaccagcggggagctagaagccctgttcaacctgacggagctggac
ctatcccagaataacttcagcagtgtggaagccgtgggcctggccaacatgaaccagctc
accaccctgcacctggaggagaaccagatcagccagctgcccgaccactgcctgcaggac
cttagcaacctgcaggagctctacatcaaccacaaccagatcagcaccattgccccaggg
gccttctctggcctgcgcagcctgctgcgcctccacctcaactccaacaggctccgggtc
atcgacagccgctggtttgaggccacgcccaacctggagatcctgatgattggcgataac
cccgtcattggtatcctggacatgaacttcaagcccctggggagtctgaggagcctggtt
ctggccggcatggatctcaccgacgttcccgggagtgctctggtgggtctggataacctg
gaaagcctgtccttttacgacaacaagctggtccgagttccccagctggccctgcagaaa
gtgcagaacctgaagttcctggacctgaacaagaacccggtgcacaagatccaggagggg
gacttcaggaacatgctgcatctgaaggagcttggcatcaacaacatggctgagctggtg
tccatcgaccgctacgccctggacaacctgcctgagctgaccaagctggagggcaccaac
aacccaaagctgtcctttgtccaccggacggccttcagggacgtgtcctcattggagagc
ctgatgctcaacaacaacgccctcaatgccatctaccagcgcaccgtggaggcgctgccc
aatctgcgcgagatcagcctgcacagcaatccgctgcgctgtgactgcgtcatccagtgg
atgagctcaaacaggaccagtgtgcgattcatggagccgcgggccatgctgtgtagctca
ccgcctgagctccggggccagcaggtcagggaggtgaggctacaggactccccagagcag
tgcctgcccctcatctcccacaacaccttccccagccacctgagcctagagctgggcatg
agtgtcagcttggactgccgggccatggccgagcccgagcccgaaatctactgggtgtct
cctatggggagcaagatcacggtagacatggtgtcagagcggtaccacctgagcagtgag
ggcaccctgcggctgtcccaagtccaggtggaggactcaggccgctacacctgcgtggct
cagaacacagagggggccgacacacgcgtcaccaccatccgggtcaacggcaccctgctg
gacagtgtcgaggtgatgaagatctacgtcaagcagaccgagtcccactccattctggtc
tcctggaagattaactccaacgtcatgacctccaaccttaaatgggcctcagccaccatg
aagattgacaatccccacatcacctacactgcacgcgtgcccgtcgacgtgcacgagtac
aacctgacccacctgcagccgggcactgagtatgaggtgtgcctcaccgtctccaacatc
cacctgcagacccacaagtcgtgtgtcaatgtgaccacgcgcagcaacaccttcgccctg
gacgtgtcggaccagaggcctagtgccgccctgctagtcgtcatggccaccatgctggcc
ttcctcagcctggctacggtgggggtgtacgtggcacggcgctggaagaggaagaactac
caccactccctgaagaagtacatgcagaagacctcctccatccccctcaatgagctctac
ccgcccctcatcaacctgtgggaggtggacagtgagaaggacaaggagggcggggcagag
agcaagccctcccccgtggacaccacacgcagctactacatgtgttga
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