Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413582
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Entry
139413582 CDS
T10872
Name
(RefSeq) small COPII coat GTPase SAR1B-like isoform X1
KO
K07953
GTP-binding protein SAR1 [EC:3.6.5.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139413582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139413582
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139413582
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
139413582
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Sar
139413582
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GFIT
Motif
Pfam:
Arf
G-alpha
SRPRB
MMR_HSR1
Roc
Ras
GTP_EFTU
RELT
Motif
Other DBs
NCBI-GeneID:
139413582
NCBI-ProteinID:
XP_071017208
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Position
1:complement(85950735..85959953)
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AA seq
198 aa
AA seq
DB search
MSFLFDWLYRGFSGVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPT
SEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGVVFLVDCADHDRLTESKIELDALLA
DETILSVPVLVLGNKIDRPEAISEGGLREAFVLDGQCTGKGNVSLKDLQARPLEIFMCSV
LKKQGYGDGFRWLAQYID
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcctctttgattggctctacagaggctttagtggtgtgctacagtttttaggg
ttgtacaaaaaatctggaaagttggttttcctggggttggataatgctggtaaaacaacc
ctgttgcatatgctgaaagatgaccgacttggacagcatgtgcccacgttgcatccaaca
tcggaagagttgacgatagctggaatgacattcaccacgtttgatctgggcggccacgta
caagctagaagagtttggaagaactacctgccggctatcaatggagttgtctttctggtt
gactgtgccgaccacgaccgccttacagaatccaagatcgaacttgatgctctgttagca
gatgagaccatcctctctgtgcctgtgctggtcctgggtaacaagatagaccgtcctgaa
gccatcagtgaagggggactgagagaggcgttcgttctcgatggacaatgcactggaaag
ggtaacgtgtcgttgaaggatctgcaggcacgacctctggagattttcatgtgcagtgtc
ctgaagaagcagggctatggagatggcttcaggtggctggcacaatacatcgactga
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