Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413604
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Entry
139413604 CDS
T10872
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139413604
09143 Cell growth and death
04210 Apoptosis
139413604
09144 Cellular community - eukaryotes
04530 Tight junction
139413604
04540 Gap junction
139413604
09142 Cell motility
04814 Motor proteins
139413604
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139413604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139413604
03036 Chromosome and associated proteins [BR:
ocla03036
]
139413604
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139413604
04147 Exosome [BR:
ocla04147
]
139413604
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139413604
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139413604
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139413604
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139413604
Exosomal proteins of other body fluids (saliva and urine)
139413604
Exosomal proteins of colorectal cancer cells
139413604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139413604
NCBI-ProteinID:
XP_071017292
LinkDB
All DBs
Position
7:complement(61867778..61871864)
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AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtccacgtgggccaggctggtgtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccagcccgatggcaagatgcccagtgacaag
accattggaggaggagatgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagggctgtgtttgtagatctggagcccactgtcatcgatgaggtgcgttct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagattattgacttggtactggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggcaccggttctggtttcacctccctgttgatggagcgcttgtctgttgac
tacggcaagaagtccaaacttgagttctccatctacccagctccccaggtgtccacagcc
gttgttgagccctacaacgccatcctgaccacccacaccaccctggagcactctgattgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaaccttgatattgag
cgtccctcctacactaatcttaaccggttgatcagtcagattgtgtcctccatcactgca
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttcccgctggccacctatgccccagtgatctcggcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaacgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgtcaatgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccacca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggcagaggcctgggcccgtcttgaccacaagtttgacctgatgtacgcc
aagcgtgcttttgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaggacatggctgccctggagaaagattatgaagaggtgggagcagatagtgtg
gagggggaggaggagggagaagaatactaa
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