Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413698
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Entry
139413698 CDS
T10872
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139413698
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139413698
mRNA cycle factors
Stress granule specific factors
139413698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139413698
NCBI-ProteinID:
XP_071017474
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All DBs
Position
7:complement(65763187..65770849)
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AA seq
704 aa
AA seq
DB search
MFQCPGNPMSSAAASPMQQLSQPQPGYSIPCASSPLPSESASHPLRSSALPLGSATPFSP
TSTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLSLGDQHWEAE
GTSIKKAQHSAAATALAQTTMPKPSMRNNTRNNTVDCMTQTVELNSLCMKLGMKPMYKPI
DPYPGMRPPSFNYNIRAPGPYQRSMQQYYYPFPPVGPVLYHMELNIGGQQFHGKGRTRQL
AKHDAASKALKTLQKEPILLQQLPEMNGEDTEENLNKSEISQVFEIALKRNMPVNFEVLK
EAGPPHMKSFMVRVAVGEFCGEGEGKSKKIAKKLAATAVLEELRRLPQLIPCVEKLQPAR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYNMLTERGLPRRREFVMQVT
VCGQCAEGLGPSKKVAKKNAAEKMLELLGFKVPQPQPHKPALKTDEKVPLKKNGDGRKVT
FFEPGSVEESQSLGSKEEDYRLPFLSHQQLPAGILLMVPEVAQAVGASPSQGHQNKDYGP
RANPAKATLTAIIANELLYAGASLTAETILKSQNSVGHLVPHGPLTRPSELLSYLANVQG
LQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKILSELDQHQQ
QTNDRAGNTPLSGCGKQDMEGSDSLLIKQANSSTLGQQTLDGTV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttccagtgtccgggtaaccctatgtccagcgctgctgccagccccatgcagcagctg
tctcagccccagccagggtacagcatcccctgtgcctcaagtcccctgccctctgagagc
gccagtcaccctctccggagctcagccctgcccttgggctcagccactcccttcagcccc
acctccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtctggtgaat
gagttagcccgtttcaataagatccagcctgagtataagctgctctgtgagcaaggacca
gctcactccaagatcttttcagtgaggttatcgctaggggatcagcactgggaggcagag
gggaccagcataaagaaggcccagcactctgcagctgccacagccttggcccagaccaca
atgcccaaacctagcatgaggaacaatacccgcaacaacacagtagactgcatgacgcaa
acggtggagctgaattccctctgtatgaagttagggatgaagcctatgtacaagcctata
gacccttaccccgggatgagaccacccagctttaactacaacatcagggcaccggggcct
taccaacgctccatgcaacagtactactacccgtttcccccagtggggccggtgctgtac
cacatggagctgaacatcgggggccagcagttccacgggaaggggcgtacgcggcagctc
gccaaacacgacgccgcctccaaggccctgaagactctgcagaaggagcccatactgctg
cagcagctgcctgagatgaatggagaagatactgaagagaacctcaacaaatcagaaatc
agccaggtgtttgagatcgcactgaagaggaacatgcctgtcaactttgaggttctgaag
gaggcaggtcctccccacatgaagagcttcatggtgcgtgtggcggtgggggagttctgt
ggagaaggcgagggcaagagtaagaagatcgctaagaagctggcagctacagccgtgctg
gaggaactgaggagactgccccagctgatcccctgcgtggaaaagctgcagccagcacgc
atcaagaagaagaccaagtccatcattaagctgcagaccagtccagaatatggccagggc
atgaaccccatcagcagactggctcagatccagcaggctaagaaagagaaggaaccagag
tacaacatgctgacagagagggggctgcccagacgcagggagtttgttatgcaggtgacg
gtgtgtggtcagtgtgcggagggcttgggccccagtaagaaggtagcgaagaagaacgca
gcagagaagatgctggagcttctaggtttcaaagtgcctcagccgcagccccacaaacct
gcgctcaaaacggacgaaaaggttccactgaagaaaaatggagatgggaggaaagtgacc
ttctttgagccaggctctgtggaagagagccagtcgctgggttccaaggaggaggactac
cgcctgcccttcctcagccaccagcagctcccagcaggcattctgctcatggtgcccgag
gtggcccaggctgtaggggccagccctagccaggggcaccagaacaaggactacggtccc
cgggccaaccctgccaaggccaccttgacggccatcatcgccaatgagctgctgtacgct
ggtgcctccctgaccgccgagaccattctgaagagccagaacagtgtgggtcatctagta
ccccatggacccctgaccagaccctctgaactactcagctacctggccaatgtacaggga
ctgcaggtagaatacaaagacttccccaaaaacaacaagaatgaatttgtatcgctgatc
aactgctcctcccagccccccctcatcagccacggcattggcaaggacgtggagtcctgt
cacgacatggctgccttgaatatcctgaagattctgtcagagctggaccagcaccagcag
cagaccaatgacagggcagggaacacaccactctctgggtgtggtaaacaggacatggag
ggcagtgactctctcctcatcaaacaggctaactcaagcaccttgggacaacagactctg
gatggcactgtctag
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